FFCP PHASE1:Hg19::chr19:48867699..48867772,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:48867699..48867772,+
|short_description=p1@SYNGR4
|description=CAGE_peak_1_at_SYNGR4_5end
|association_with_transcript=42bp_to_ENST00000344846,uc002piz.2_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23546 | |EntrezGene=23546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11502 | |HGNC=11502 | ||
|TSSclassifier=strong | |||
|UniProt=O95473 | |UniProt=O95473 | ||
|association_with_transcript=42bp_to_ENST00000344846,uc002piz.2_5end | |||
|cluster_id=chr19:48867699..48867772,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_SYNGR4_5end | |||
|id=chr19:48867699..48867772,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.27e-18!172;CL:0000566!6.27e-18!172;CL:0000988!2.88e-17!182;CL:0002032!7.28e-16!165;CL:0000837!7.28e-16!165;CL:0000738!1.46e-13!140;CL:0002031!8.26e-12!124;CL:0002087!5.79e-11!119;CL:0000542!1.15e-08!53;CL:0000051!1.15e-08!53;CL:0000838!3.53e-08!52;CL:0000763!4.06e-08!112;CL:0000049!4.06e-08!112;CL:0000945!8.70e-08!24;CL:0000826!8.70e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000037;9.80e-09;1!CL:0001024;9.80e-09;1!CL:0002092;4.23e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,9.46e-09,1;CL:0000988,3.05e-08,177;CL:0000037,1.11e-07,168;CL:0002092,3.69e-07,10;CL:0002032,5.59e-07,161;CL:0000837,5.59e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.24e-18!235;DOID:14566!1.92e-18!239;DOID:2531!1.00e-13!51;DOID:0060083!1.00e-13!51;DOID:305!1.90e-12!106;DOID:1240!6.44e-11!39;DOID:0050687!5.52e-10!143;DOID:0050686!7.28e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.13e-09;1!DOID:0070004;8.13e-09;1!DOID:178;2.12e-08;1!DOID:326;2.12e-08;1!DOID:3978;2.12e-08;1!DOID:3394;2.12e-08;1!DOID:5844;2.12e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.45e-10,51;DOID:0060083,7.45e-10,51;DOID:4960,8.15e-09,1;DOID:0070004,8.15e-09,1;DOID:178,2.13e-08,1;DOID:326,2.13e-08,1;DOID:3978,2.13e-08,1;DOID:3394,2.13e-08,1;DOID:5844,2.13e-08,1;DOID:1240,4.48e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.21e-07!102;UBERON:0003061!9.21e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0.251085279189606,1.06978768047132,0.821005894499457,0.787107813136792,1.18009283054671,0,0.154816123316076,0,0.30120591877825,0,1.08454080812422,0.142169232487422,2.64240395401362,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,1.18241114944293,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0,0.56738522469114,0,0,1.0429658368404,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.300353785683013,0.48217676009124,0.285012743741249,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0.977766799900771,0,0,0.222820913770347,0,0.443067789167242,0,0,0,0.493313713811028,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0.759059076058509,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,4.58426764241994,0.728590576585084,0.370784442784429,0.649094787309367,0.174129737299267,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.545492241181669,0,0.609868530647977,0.397589304964456,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0,0.505754070234305,0.241011029883482,0.661763836394364,1.08939722046203,0.71181185733329,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,2.57545848628462,0.246217006087397,0,0,0.93733833986777,0.503946384596579,0,0.0895585227028483,0,0,4.92663237895944,0.176096868026452,0,0.144119953416961,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0.557409525377156,0.144269212976445,0.426851060090485,0.797131363644112,0.199579371432817,0.191505370132367,0.846694330895531,0.324621940274555,0,0,0.156679895773023,0,0.50787533340481,0,0.201799707191048,1.27753871307098,0,1.53620382154229,0.223676107892416,0.333698283423817,0.390776190804081,0,1.23087398947712,0,0.33307196799782,1.4098700508785,0.935702702041099,0,0.121360521749513,0.334330152832435,0.284136146806413,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0,0.329607748453519,0,0,0,0.503865495708552,0,0.492339221844278,0,0,0.358042349351218,1.02314474045374,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.699679999969566,0,0.341380344856499,0.254253650292766,0.709163045303809,0,0,0,0,0.60298219312704,0,0,0,0,1.30726156222788,0.41827123283581,0,0,0,0.269272933229316,0.434589487688032,0,0,0,1.02193298195737,0.156980256395025,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0.158936578980379,0.421996129056054,0,0.989471500037586,0.649165919226273,0,0.0884575645033392,0,1.18608451472249,0.247127877893006,0.417687798021821,0,0,0,0.182454789215666,0.586993856796269,0,0.394584402849391,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.391969589657511,0.435296032902013,0.17472666824203,0.343972064943233,0.677294319023596,0.511625219603299,0.739039113478883,0,0.353024506766001,0,0,0,0.0633107959558787,0.391102765469606,0.320635281006135,0,0,0.576361668616424,0,0,0.288109595976299,0.124252535565433,0.235694034616795,0.271808412147228,0,0,0,0,0.136905378891993,0,0,1.31443677139657,0,0,0,1.19807400299395,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0.423366660328922,0,0.136203406111576,0,0.275078873194468,0,0.449947783103001,3.86900977278975,0,0.670869375198532,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0.656740165994712,0,0,0.146552233678082,0,0,0,1.53978154095896,0,0.106787412567695,0,0,0,0,0.365377795142688,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p1@SYNGR4 | |||
}} | }} |
Latest revision as of 01:59, 19 September 2015
Short description: | p1@SYNGR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNGR4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 42bp_to_ENST00000344846, uc002piz.2_5end |
EntrezGene: | SYNGR4 |
HGNC: | 11502 |
UniProt: | O95473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 9.46e-09 | 1 |
hematopoietic cell | 3.05e-08 | 177 |
hematopoietic stem cell | 1.11e-07 | 168 |
bone marrow cell | 3.69e-07 | 10 |
hematopoietic oligopotent progenitor cell | 5.59e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.59e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.45e-10 | 51 |
immune system cancer | 7.45e-10 | 51 |
bone marrow cancer | 8.15e-09 | 1 |
myeloma | 8.15e-09 | 1 |
vascular disease | 2.13e-08 | 1 |
ischemia | 2.13e-08 | 1 |
extrinsic cardiomyopathy | 2.13e-08 | 1 |
myocardial ischemia | 2.13e-08 | 1 |
myocardial infarction | 2.13e-08 | 1 |
leukemia | 4.48e-08 | 39 |