UBERON:0000153: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000153 | |||
|is_a=UBERON:0000475 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=anterior region of body | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 17:06, 12 September 2014
| Name: | anterior region of body |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000475(organism subdivision) |
|---|
Children
| part of: | UBERON:0000033 (head),UBERON:0000974 (neck),UBERON:0002102 (forelimb),UBERON:0005417 (forelimb bud),UBERON:0005419 (pectoral appendage bud),UBERON:0007811 (craniocervical region),UBERON:0009113 (thymic region) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10027-101D9 (thymus, adult, pool1)
- 10030-101E3 (retina, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10061-101H7 (throat, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10097-102C7
- 10195-103E6 (olfactory region, adult)
- 10199-103F1 (parotid gland, adult)
... further results Mouse (Mus musculus)
- 10027-101D9 (thymus, adult, pool1)
- 10030-101E3 (retina, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10061-101H7 (throat, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10097-102C7
- 10195-103E6 (olfactory region, adult)
- 10199-103F1 (parotid gland, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000153 (anterior region of body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.52e-36 | FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_836c7f7771c1b5f9a4b218e50c8b75da | p2@PAX9 |
| 9.52e-36 | FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_836c7f7771c1b5f9a4b218e50c8b75da | p2@PAX9 |
| 2.95e-35 | FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_0b1ebaf7778115ae7460d810f7ff7c8a | p4@uc009bpa.1 |
| 2.95e-35 | FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_0b1ebaf7778115ae7460d810f7ff7c8a | p4@uc009bpa.1 |
| 4.48e-35 | FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_91adb1fa7205a2f649305a666970f27a | p8@uc009bpa.1 |
| 4.48e-35 | FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_91adb1fa7205a2f649305a666970f27a | p8@uc009bpa.1 |
| 1.16e-33 | FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_0d7eddc03ba7e5e27360a947358f651d | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 1.16e-33 | FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_0d7eddc03ba7e5e27360a947358f651d | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 3.51e-33 | FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_78e6978b63bad306fb4779cd8bb6ee1d | p@chr12:108361918..108361930, - |
| 3.51e-33 | FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_78e6978b63bad306fb4779cd8bb6ee1d | p@chr6:41491752..41491776, - |
| 3.51e-33 | FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_78e6978b63bad306fb4779cd8bb6ee1d | p@chr12:108361918..108361930, - |
| 3.51e-33 | FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_78e6978b63bad306fb4779cd8bb6ee1d | p@chr6:41491752..41491776, - |
| 2.36e-32 | FFCP PHASE1:Mm9::chr10:20880874..20880893,+#_d212578b74d9e2c85bb4149dd8aa586b | p@chr10:20880874..20880893, + |
| 2.36e-32 | FFCP PHASE2:Mm9::chr10:20880874..20880893,+#_d212578b74d9e2c85bb4149dd8aa586b | p@chr10:20880874..20880893, + |
| 3.23e-32 | FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_1fa7f2ef04aece46a7fa94c912a6f209 | p2@ENSMUST00000103283 |
| 3.23e-32 | FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_1fa7f2ef04aece46a7fa94c912a6f209 | p2@ENSMUST00000103283 |
| 3.65e-32 | FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_020a551a6b83088144054014b882674e | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 3.65e-32 | FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_020a551a6b83088144054014b882674e | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 1.17e-31 | FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_bbd37ed33a93ff8d0627dfa0d137b287 | p@chr6:41494001..41494028, + |
| 1.17e-31 | FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_bbd37ed33a93ff8d0627dfa0d137b287 | p@chr6:41494001..41494028, + |
| 1.57e-31 | FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_cabec448a3ecc9c7989f1b3104384eaa | p@chr9:44807434..44807445, - |
| 1.57e-31 | FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_cabec448a3ecc9c7989f1b3104384eaa | p@chr9:44807434..44807445, - |
| 1.91e-31 | FFCP PHASE2:Hg19::chr1:75599672..75599682,-#_9863f2300a8d12673e1cd73fa67501dd | p@chr1:75599672..75599682, - |
| 1.91e-31 | FFCP PHASE1:Hg19::chr1:75599672..75599682,-#_9863f2300a8d12673e1cd73fa67501dd | p@chr1:75599672..75599682, - |
| 1.94e-31 | FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_9b1e91d1d1a7b28869394395ca968439 | p11@Prkcq |
| 1.94e-31 | FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_9b1e91d1d1a7b28869394395ca968439 | p11@Prkcq |
| 2.28e-31 | FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_fc8660b57d96661b2771b9b82873cc64 | p@chr14:54791784..54791787, + |
| 2.28e-31 | FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_fc8660b57d96661b2771b9b82873cc64 | p@chr14:54791784..54791787, + |
| 2.52e-31 | FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_a1121054e669394e597a1149c2ea86ce | p@chr6:41492605..41492621, + |
| 2.52e-31 | FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_a1121054e669394e597a1149c2ea86ce | p@chr6:41492605..41492621, + |
| 2.88e-31 | FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_04c332b55c00761ad97f1a2d558525df | p@chr9:44809185..44809215, - |
| 2.88e-31 | FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_04c332b55c00761ad97f1a2d558525df | p@chr9:44809185..44809215, - |
| 3.03e-31 | FFCP PHASE1:Mm9::chr2:156796238..156796256,-#_0d4894e10b9b2740813c8c784bb207d7 | p@chr2:156796238..156796256, - |
| 3.03e-31 | FFCP PHASE2:Mm9::chr2:156796238..156796256,-#_0d4894e10b9b2740813c8c784bb207d7 | p@chr2:156796238..156796256, - |
| 3.1e-31 | FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_9d2d249b64456fcea43e4c9888bb1dca | p1@ENSMUST00000103263 |
| 3.1e-31 | FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_9d2d249b64456fcea43e4c9888bb1dca | p1@ENSMUST00000103263 |
| 3.21e-31 | FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_6aadc9432a388d59fbbe5b560696ce44 | p@chr9:44793518..44793537, + |
| 3.21e-31 | FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_6aadc9432a388d59fbbe5b560696ce44 | p@chr9:44793518..44793537, + |
| 3.68e-31 | FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_c97711239749195b8be3e81df12d7594 | p@chr6:41071548..41071565, + |
| 3.68e-31 | FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_c97711239749195b8be3e81df12d7594 | p@chr6:41071548..41071565, + |
| 6.79e-31 | FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_2b0f6f3bc2e9f2c14eb173e4532375af | p5@Themis |
| 6.79e-31 | FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_2b0f6f3bc2e9f2c14eb173e4532375af | p5@Themis |
| 7.38e-31 | FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_52682007fa9a73568ea9e2cdc58a3bee | p5@uc009bpa.1 |
| 7.38e-31 | FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_52682007fa9a73568ea9e2cdc58a3bee | p5@uc009bpa.1 |
| 8.46e-31 | FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_d06168122c410ad85e60bf9fdfe68016 | p2@uc009bnp.1, p2@uc012eki.1 |
| 8.46e-31 | FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_d06168122c410ad85e60bf9fdfe68016 | p2@uc009bnp.1, p2@uc012eki.1 |
| 4.14e-30 | FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_8569a95a7085dbf13e63d345f796b80c | p5@Tcf7 |
| 4.14e-30 | FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_8569a95a7085dbf13e63d345f796b80c | p5@Tcf7 |
| 4.86e-30 | FFCP PHASE2:Mm9::chr6:124838183..124838199,-#_8a5fb1c63d3f96102abceb2a274a1eeb | p2@Cd4 |
| 4.86e-30 | FFCP PHASE1:Mm9::chr6:124838183..124838199,-#_8a5fb1c63d3f96102abceb2a274a1eeb | p2@Cd4 |
| 8.52e-30 | FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_6f4447ed5ac0943dfd2b7b6d701b289b | p@chr14:61328148..61328173, + |
| 8.52e-30 | FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_6f4447ed5ac0943dfd2b7b6d701b289b | p@chr14:61328148..61328173, + |
| 1.05e-29 | FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_936772e6b8c67930d8df87972bac4913 | p1@uc012ekr.1 |
| 1.05e-29 | FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_936772e6b8c67930d8df87972bac4913 | p1@uc012ekr.1 |
| 1.19e-29 | FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_ea87b35924856635d99727ae1ef96abe | p2@1810009J06Rik |
| 1.19e-29 | FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_ea87b35924856635d99727ae1ef96abe | p2@1810009J06Rik |
| 1.46e-29 | FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_6c28a65104a3f6d3cd6b5b7fda905e42 | p1@uc012ekk.1 |
| 1.46e-29 | FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_6c28a65104a3f6d3cd6b5b7fda905e42 | p1@uc012ekk.1 |
| 1.59e-29 | FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_43b2f4b8ff03c87424a1c47a6d6c68d1 | p1@ENSMUST00000103265 |
| 1.59e-29 | FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_43b2f4b8ff03c87424a1c47a6d6c68d1 | p@chr7:133512043..133512060, - |
| 1.59e-29 | FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_43b2f4b8ff03c87424a1c47a6d6c68d1 | p1@ENSMUST00000103265 |
| 1.59e-29 | FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_43b2f4b8ff03c87424a1c47a6d6c68d1 | p@chr7:133512043..133512060, - |
| 1.59e-29 | FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_43b2f4b8ff03c87424a1c47a6d6c68d1 | p3@uc009bpo.1, p3@uc009bpp.1 |
| 1.59e-29 | FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_43b2f4b8ff03c87424a1c47a6d6c68d1 | p3@uc009bpo.1, p3@uc009bpp.1 |
| 1.97e-29 | FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_aed1b74ab9545ff8432736f525d9e893 | p2@uc009bpa.1 |
| 1.97e-29 | FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_aed1b74ab9545ff8432736f525d9e893 | p2@uc009bpa.1 |
| 2.12e-29 | FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_a4afcbba76e08416c712e5fb8b953adb | p2@Sh2d1a |
| 2.12e-29 | FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_a4afcbba76e08416c712e5fb8b953adb | p2@Sh2d1a |
| 2.25e-29 | FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_290165140cb682d8a8bbdaf14b4c67c8 | p5@Trat1 |
| 2.25e-29 | FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_290165140cb682d8a8bbdaf14b4c67c8 | p5@Trat1 |
| 2.42e-29 | FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_5d6d6e590ba1161ffab7c2148c19bb91 | p6@uc009bpa.1 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_5d6d6e590ba1161ffab7c2148c19bb91 | p6@uc009bpa.1 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_5d6d6e590ba1161ffab7c2148c19bb91 | p@chr4:125978325..125978339, - |
| 2.42e-29 | FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_5d6d6e590ba1161ffab7c2148c19bb91 | p8@Lat |
| 2.42e-29 | FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_5d6d6e590ba1161ffab7c2148c19bb91 | p@chr4:125978325..125978339, - |
| 2.42e-29 | FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_5d6d6e590ba1161ffab7c2148c19bb91 | p8@Lat |
| 2.42e-29 | FFCP PHASE2:Mm9::chr11:87627824..87627837,-#_5d6d6e590ba1161ffab7c2148c19bb91 | p@chr11:87627824..87627837, - |
| 2.42e-29 | FFCP PHASE1:Mm9::chr11:87627824..87627837,-#_5d6d6e590ba1161ffab7c2148c19bb91 | p@chr11:87627824..87627837, - |
| 2.51e-29 | FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_f2de1239215001b6f8f1ee9909d26a8f | p@chr14:54794540..54794554, + |
| 2.51e-29 | FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_f2de1239215001b6f8f1ee9909d26a8f | p@chr14:54794540..54794554, + |
| 2.63e-29 | FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_09fb92d3b5ab80968e84a9e0f045874d | p@chr14:54496363..54496388, + |
| 2.63e-29 | FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_09fb92d3b5ab80968e84a9e0f045874d | p@chr6:41491801..41491815, - |
| 2.63e-29 | FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_09fb92d3b5ab80968e84a9e0f045874d | p@chr14:54496363..54496388, + |
| 2.63e-29 | FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_09fb92d3b5ab80968e84a9e0f045874d | p@chr6:41491801..41491815, - |
| 2.72e-29 | FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_feb5a5e427b4c4df2afb8b4aac2d7341 | p2@Gm5409 |
| 2.72e-29 | FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_feb5a5e427b4c4df2afb8b4aac2d7341 | p2@Gm5409 |
| 3.02e-29 | FFCP PHASE1:Mm9::chr12:114663631..114663645,-#_58be81fb36288dbf313be1a8ff0a303d | p@chr12:114663631..114663645, - |
| 3.02e-29 | FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_58be81fb36288dbf313be1a8ff0a303d | p7@Lat |
| 3.02e-29 | FFCP PHASE2:Mm9::chr12:114663631..114663645,-#_58be81fb36288dbf313be1a8ff0a303d | p@chr12:114663631..114663645, - |
| 3.02e-29 | FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_58be81fb36288dbf313be1a8ff0a303d | p7@Lat |
| 3.16e-29 | FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_6310e74963b07760a808230833b9412f | p@chr6:41138311..41138333, + |
| 3.16e-29 | FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_6310e74963b07760a808230833b9412f | p@chr6:41138311..41138333, + |
| 3.46e-29 | FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_8a9f4001a6db65c237f4023df71c2b20 | p1@ENSMUST00000103282 |
| 3.46e-29 | FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_8a9f4001a6db65c237f4023df71c2b20 | p@chr6:41494376..41494389, - |
| 3.46e-29 | FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_8a9f4001a6db65c237f4023df71c2b20 | p@chr6:41494376..41494389, - |
| 3.46e-29 | FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_8a9f4001a6db65c237f4023df71c2b20 | p1@ENSMUST00000103282 |
| 3.62e-29 | FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_e6886f6a4955089bead0038d7ab65ea1 | p5@uc009bnp.1, p5@uc012eki.1 |
| 3.62e-29 | FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_e6886f6a4955089bead0038d7ab65ea1 | p5@uc009bnp.1, p5@uc012eki.1 |
| 3.64e-29 | FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_719f6d0925089f653ad49edc9f6958c3 | p@chr6:41489240..41489252, + |
| 3.64e-29 | FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_719f6d0925089f653ad49edc9f6958c3 | p@chr6:41489240..41489252, + |
