UBERON:0005754: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros." [http://www.gudmap.org/About/Tutorial/DevMUS.html#DMK_Nephron] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005754 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=rostral part of nephrogenic cord | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000922;;UBERON:0004875 | |part_of=UBERON:0000922;;UBERON:0004875 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 17:54, 12 September 2014
| Name: | rostral part of nephrogenic cord |
|---|---|
| Namespace: | FANTOM |
| Definition: | "The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros." [1] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0004875(nephrogenic cord) |
Children
| develops from: | UBERON:0002120 (pronephros) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005754 (rostral part of nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834a | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834a | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834a | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834a | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834a | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834a | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834a | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834a | p@chr10:127470655..127470664, + |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3d | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3d | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacae | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacae | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr11:76361451..76361499, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72 | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72 | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr14:63627556..63627564, - |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4c | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4c | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:31379486..31379501, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_7c326baff5045da379d5709bce71ac83 | p@chrX:50280152..50280179, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_7c326baff5045da379d5709bce71ac83 | p@chr11:101958855..101958871, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_7c326baff5045da379d5709bce71ac83 | p3@Acad8 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_7c326baff5045da379d5709bce71ac83 | p@chr19:17591760..17591765, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_7c326baff5045da379d5709bce71ac83 | p@chr10:28772042..28772046, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:83143938..83143953,-#_7c326baff5045da379d5709bce71ac83 | p@chr15:83143938..83143953, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_7c326baff5045da379d5709bce71ac83 | p@chr8:19141482..19141496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:134913640..134913649,+#_7c326baff5045da379d5709bce71ac83 | p@chr4:134913640..134913649, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:31379454..31379466, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_7c326baff5045da379d5709bce71ac83 | p@chr2:160573065..160573077, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_7c326baff5045da379d5709bce71ac83 | p2@Rnase10 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21379306..21379315, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:89597834..89597840, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_7c326baff5045da379d5709bce71ac83 | p9@Tecta |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:90155951..90155962, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_7c326baff5045da379d5709bce71ac83 | p@chr1:155697874..155697885, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:23057222..23057234,+#_7c326baff5045da379d5709bce71ac83 | p1@Defb13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr3:107731917..107731926,-#_7c326baff5045da379d5709bce71ac83 | p@chr3:107731917..107731926, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_7c326baff5045da379d5709bce71ac83 | p@chr9:70761931..70761971, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_7c326baff5045da379d5709bce71ac83 | p@chr9:26719400..26719404, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_7c326baff5045da379d5709bce71ac83 | p5@Defb43 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_7c326baff5045da379d5709bce71ac83 | p3@Rnase13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:87922778..87922788,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:87922778..87922788, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_7c326baff5045da379d5709bce71ac83 | p@chr8:126591032..126591039, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_7c326baff5045da379d5709bce71ac83 | p@chr1:155722142..155722175, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:25565920..25565950,-#_7c326baff5045da379d5709bce71ac83 | p@chr7:25565920..25565950, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:63779573..63779582,+#_7c326baff5045da379d5709bce71ac83 | p@chr11:63779573..63779582, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:20419453..20419476,+#_7c326baff5045da379d5709bce71ac83 | p@chrX:20419453..20419476, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:138824620..138824627,+#_7c326baff5045da379d5709bce71ac83 | p@chr4:138824620..138824627, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:61976287..61976297,-#_7c326baff5045da379d5709bce71ac83 | p@chr10:61976287..61976297, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_7c326baff5045da379d5709bce71ac83 | p@chr14:103746280..103746298, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379118..21379120,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21379118..21379120, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_7c326baff5045da379d5709bce71ac83 | p@chr11:101958876..101958883, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:35252614..35252635,-#_7c326baff5045da379d5709bce71ac83 | p3@Ly6g5b |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_7c326baff5045da379d5709bce71ac83 | p6@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:14306714..14306740,+#_7c326baff5045da379d5709bce71ac83 | p@chr17:14306714..14306740, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr19:17585885..17585901,-#_7c326baff5045da379d5709bce71ac83 | p@chr19:17585885..17585901, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:46041606..46041640,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:46041606..46041640, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_7c326baff5045da379d5709bce71ac83 | p@chr14:63611303..63611312, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:59845349..59845371,-#_7c326baff5045da379d5709bce71ac83 | p@chr11:59845349..59845371, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:63611201..63611210,+#_7c326baff5045da379d5709bce71ac83 | p@chr14:63611201..63611210, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_7c326baff5045da379d5709bce71ac83 | p4@Bpi |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_7c326baff5045da379d5709bce71ac83 | p@chr12:16664708..16664723, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_7c326baff5045da379d5709bce71ac83 | p@chr9:100350777..100350782, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_7c326baff5045da379d5709bce71ac83 | p3@Wdr25 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:105798218..105798228,-#_7c326baff5045da379d5709bce71ac83 | p@chr11:105798218..105798228, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21383212..21383225,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21383212..21383225, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:12571771..12571780, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:73221016..73221031,+#_7c326baff5045da379d5709bce71ac83 | p@chr17:73221016..73221031, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:52101299..52101305,+#_7c326baff5045da379d5709bce71ac83 | p@chr10:52101299..52101305, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_7c326baff5045da379d5709bce71ac83 | p@chr3:103650758..103650778, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_7c326baff5045da379d5709bce71ac83 | p@chr16:92995710..92995753, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_7c326baff5045da379d5709bce71ac83 | p@chr15:75304916..75304925, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651764..35651782,-#_7c326baff5045da379d5709bce71ac83 | p2@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:89597660..89597668, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51676936..51676963,-#_7c326baff5045da379d5709bce71ac83 | p6@Rnase12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_7c326baff5045da379d5709bce71ac83 | p@chr15:83143938..83143953, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_7c326baff5045da379d5709bce71ac83 | p3@Glb1l2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:150092027..150092070,-#_7c326baff5045da379d5709bce71ac83 | p@chr4:150092027..150092070, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_7c326baff5045da379d5709bce71ac83 | p@chr2:25678985..25679033, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_7c326baff5045da379d5709bce71ac83 | p2@Wfdc11 |
