UBERON:0009497: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0009550 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0009497 | |||
|is_a=UBERON:0000490 ;;UBERON:0003929 ;;UBERON:0005911 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of=UBERON:0006235 | |name=epithelium of foregut-midgut junction | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0006235;;UBERON:0003929;;UBERON:0006235 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=emapa_ehdaa2 | ||
| | |synonym= | ||
|union_of= | |||
|xref=EHDAA2:0000573;;EMAPA:16564 | |||
}} | }} |
Latest revision as of 18:05, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000490(unilaminar epithelium),UBERON:0003929(gut epithelium),UBERON:0005911(endo-epithelium) |
---|---|
develops_from: | UBERON:0009550(endoderm of foregut-midgut junction) |
part_of: | UBERON:0006235(foregut-midgut junction),UBERON:0003929(gut epithelium),UBERON:0006235(foregut-midgut junction) |
Children
is a: | UBERON:0003894 (liver primordium),UBERON:0004912 (biliary bud),UBERON:0008835 (hepatic diverticulum) |
---|---|
develops from: | UBERON:0003922 (pancreatic epithelial bud) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009497 (epithelium of foregut-midgut junction), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data