Personal tools

UBERON:0004819: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0004819
|alt_id=
|name=kidney epithelium
|namespace=
|def="An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
|xref=BTO:0000059;;MA:0002846
|is_a=UBERON:0000483;;UBERON:0006554
|synonym="epithelial tissue of kidney" EXACT [OBOL:automatic];;"epithelium of kidney" EXACT [OBOL:automatic];;"kidney epithelial tissue" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004819
|is_a=UBERON:0000483 ;;UBERON:0006554
|is_obsolete=
|located_in=
|located_in=
|name=kidney epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002113
|part_of=UBERON:0002113
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="epithelial tissue of kidney" EXACT [OBOL:automatic];;"epithelium of kidney" EXACT [OBOL:automatic];;"kidney epithelial tissue" EXACT [OBOL:automatic]
|union_of=
|xref=BTO:0000059;;MA:0002846
}}
}}

Latest revision as of 17:48, 12 September 2014

Name:kidney epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000059

MA:0002846
Synonyms: "epithelial tissue of kidney" EXACT [OBOL:automatic]
"epithelium of kidney" EXACT [OBOL:automatic]
"kidney epithelial tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000483(epithelium),UBERON:0006554(urinary system structure)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0004211 (nephron epithelium),UBERON:0005103 (mesonephric epithelium),UBERON:0007684 (uriniferous tubule),UBERON:0009201 (nephric duct),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004819 (kidney epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.12e-98FFCP PHASE1:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71p@chr2:693380..693398, +
7.12e-98FFCP PHASE2:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71p@chr2:693380..693398, +
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9p4@Spink12
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9p4@Spink12
2.81e-78FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2cp4@MEGF11
2.81e-78FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2cp4@MEGF11
1.04e-71FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4p4@PAX2
1.04e-71FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4p4@PAX2
1.28e-69FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136p7@HOXA10
1.28e-69FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136p7@HOXA10
4.01e-67FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186p3@PAX2
4.01e-67FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186p3@PAX2
1.1e-61FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0cp@chr1:1100457..1100470, +
1.1e-61FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0cp@chr1:1100457..1100470, +
3.28e-58FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:83143938..83143953, -
3.28e-58FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:101958844..101958851, -
3.28e-58FFCP PHASE1:Mm9::chrX:130496260..130496269,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:130496260..130496269, -
3.28e-58FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:26611214..26611227, -
3.28e-58FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:89596972..89596981, +
3.28e-58FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr12:110131571..110131579,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp15@Wars
3.28e-58FFCP PHASE2:Mm9::chr10:28772042..28772046,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr10:28772042..28772046, -
3.28e-58FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:11079838..11079844, +
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr12:16663110..16663116,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Ntsr2
3.28e-58FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:164787162..164787188, -
3.28e-58FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:53955299..53955306, +
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr1:18213651..18213663,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp1@Defb44-ps
3.28e-58FFCP PHASE2:Mm9::chr14:51627586..51627595,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@Rnase10
3.28e-58FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:96014490..96014496, +
3.28e-58FFCP PHASE1:Mm9::chr4:137325863..137325870,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp15@Alpl
3.28e-58FFCP PHASE1:Mm9::chr14:51676936..51676963,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp6@Rnase12
3.28e-58FFCP PHASE2:Mm9::chr13:21379107..21379136,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21379107..21379136, +
3.28e-58FFCP PHASE2:Mm9::chr9:26610184..26610191,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@Glb1l2
3.28e-58FFCP PHASE2:Mm9::chr7:148445639..148445665,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr7:148445639..148445665, +
3.28e-58FFCP PHASE1:Mm9::chrX:10488683..10488691,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr14:51680551..51680555,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:51680551..51680555, -
3.28e-58FFCP PHASE1:Mm9::chr4:40010825..40010844,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr4:40010825..40010844, -
3.28e-58FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21381141..21381155, -
3.28e-58FFCP PHASE2:Mm9::chrX:12571771..12571780,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:12571771..12571780, -
3.28e-58FFCP PHASE2:Mm9::chr15:54678915..54678922,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:54678915..54678922, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379454..31379466,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379454..31379466, +
3.28e-58FFCP PHASE1:Mm9::chr2:25349414..25349424,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Lcn12
3.28e-58FFCP PHASE1:Mm9::chr17:73221034..73221051,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr13:52712744..52712754,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:52712744..52712754, +
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr2:164480465..164480471,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Wfdc9
3.28e-58FFCP PHASE2:Mm9::chr11:96140694..96140720,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:96140694..96140720, +
3.28e-58FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chr14:69143309..69143319,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr10:52101299..52101305,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr10:52101299..52101305, +
3.28e-58FFCP PHASE2:Mm9::chr5:110773731..110773753,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:110773731..110773753, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901540..116901549,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr4:123977104..123977120,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp1@ENSMUST00000139012, p1@uc008uqo.1
3.28e-58FFCP PHASE2:Mm9::chr4:150092027..150092070,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr4:150092027..150092070, -
3.28e-58FFCP PHASE2:Mm9::chr2:152302836..152302841,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp6@Defb20
3.28e-58FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp17@Capn5
3.28e-58FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379486..31379501, +
3.28e-58FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:75329148..75329155, +
3.28e-58FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr19:17585885..17585901, -
3.28e-58FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr13:21380610..21380620,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21380610..21380620, -
3.28e-58FFCP PHASE2:Mm9::chr9:35657557..35657582,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr12:103896102..103896116,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr12:103896102..103896116, -
3.28e-58FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21385325..21385329, -
3.28e-58FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:19141447..19141469, +
3.28e-58FFCP PHASE2:Mm9::chrX:156776465..156776473,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:156776465..156776473, -
3.28e-58FFCP PHASE2:Mm9::chr15:75304916..75304925,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:75304916..75304925, +
3.28e-58FFCP PHASE2:Mm9::chr2:158083973..158083982,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Bpi
3.28e-58FFCP PHASE1:Mm9::chr1:90368977..90368987,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:90368977..90368987, +
3.28e-58FFCP PHASE1:Mm9::chr14:66521865..66521876,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:66521865..66521876, +
3.28e-58FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:90156002..90156013, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr7:56772735..56772741, +
3.28e-58FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Spink12
3.28e-58FFCP PHASE2:Mm9::chr11:101958855..101958871,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:101958855..101958871, -
3.28e-58FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp1@9230113P08Rik
3.28e-58FFCP PHASE2:Mm9::chr11:59845404..59845416,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:59845404..59845416, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761885..70761895,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:70761885..70761895, +
3.28e-58FFCP PHASE2:Mm9::chr14:51676936..51676963,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp6@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr8:126604677..126604701,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:126604677..126604701, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650817..103650825,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr3:103650817..103650825, +
3.28e-58FFCP PHASE1:Mm9::chr12:103896102..103896116,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr12:103896102..103896116, -
3.28e-58FFCP PHASE1:Mm9::chr11:101959159..101959163,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:101959159..101959163, +
3.28e-58FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:19062951..19062955, +
3.28e-58FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:88272459..88272484, -
3.28e-58FFCP PHASE1:Mm9::chr16:22504758..22504766,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr18:44264128..44264135,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Spink12
3.28e-58FFCP PHASE2:Mm9::chr8:91107095..91107103,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:91107095..91107103, +
3.28e-58FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Ntsr2
3.28e-58FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:28323634..28323657, -
3.28e-58FFCP PHASE1:Mm9::chrX:50280126..50280140,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:50280126..50280140, +
3.28e-58FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr6:54359310..54359337, -
3.28e-58FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:164434157..164434162, -
3.28e-58FFCP PHASE1:Mm9::chr13:21379098..21379104,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21379098..21379104, -
3.28e-58FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:96150839..96150842, -
3.28e-58FFCP PHASE2:Mm9::chr1:87922962..87922982,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:87922962..87922982, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004819&oldid=3277700"