UBERON:0005754: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros." [http://www.gudmap.org/About/Tutorial/DevMUS.html#DMK_Nephron] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005754 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=rostral part of nephrogenic cord | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000922;;UBERON:0004875 | |part_of=UBERON:0000922;;UBERON:0004875 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 17:54, 12 September 2014
| Name: | rostral part of nephrogenic cord |
|---|---|
| Namespace: | FANTOM |
| Definition: | "The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros." [1] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0004875(nephrogenic cord) |
Children
| develops from: | UBERON:0002120 (pronephros) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005754 (rostral part of nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834a | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834a | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834a | p4@Defb42 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834a | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834a | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834a | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834a | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834a | p@chr10:127470655..127470664, + |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3d | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3d | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacae | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacae | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaad | p@chr11:76361451..76361499, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72 | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72 | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72 | p@chr9:26732045..26732085, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4c | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4c | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0 | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0 | p10@PAX2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:75798132..75798152, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_7c326baff5045da379d5709bce71ac83 | p@chr8:25706249..25706254, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_7c326baff5045da379d5709bce71ac83 | p@chr12:114385720..114385732, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:90155923..90155932, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:23308115..23308126,+#_7c326baff5045da379d5709bce71ac83 | p@chr16:23308115..23308126, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_7c326baff5045da379d5709bce71ac83 | p@chr9:70761885..70761895, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_7c326baff5045da379d5709bce71ac83 | p@chr9:26704579..26704582, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:100350777..100350782,+#_7c326baff5045da379d5709bce71ac83 | p@chr9:100350777..100350782, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_7c326baff5045da379d5709bce71ac83 | p@chr14:103837894..103837900, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:120078716..120078763,-#_7c326baff5045da379d5709bce71ac83 | p@chr5:120078716..120078763, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:75798157..75798162, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901540..116901549,-#_7c326baff5045da379d5709bce71ac83 | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496372..130496393,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:130496372..130496393, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_7c326baff5045da379d5709bce71ac83 | p@chr14:51680551..51680555, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379107..21379136,+#_7c326baff5045da379d5709bce71ac83 | p@chr13:21379107..21379136, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_7c326baff5045da379d5709bce71ac83 | p@chr10:56515486..56515496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_7c326baff5045da379d5709bce71ac83 | p@chr16:28323634..28323657, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164434346..164434353,-#_7c326baff5045da379d5709bce71ac83 | p@chr2:164434346..164434353, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_7c326baff5045da379d5709bce71ac83 | p3@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:89596972..89596981, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_7c326baff5045da379d5709bce71ac83 | p@chr11:101958844..101958851, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25349488..25349492,-#_7c326baff5045da379d5709bce71ac83 | p6@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_7c326baff5045da379d5709bce71ac83 | p@chr16:28323634..28323657, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:105797824..105797838,-#_7c326baff5045da379d5709bce71ac83 | p13@Cyb561 |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_7c326baff5045da379d5709bce71ac83 | p@chrX:103276578..103276585, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_7c326baff5045da379d5709bce71ac83 | p1@9230113P08Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:12571679..12571688,-#_7c326baff5045da379d5709bce71ac83 | p@chrX:12571679..12571688, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26785438..26785446,-#_7c326baff5045da379d5709bce71ac83 | p3@Acad8 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:25563187..25563205,+#_7c326baff5045da379d5709bce71ac83 | p@chr7:25563187..25563205, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_7c326baff5045da379d5709bce71ac83 | p@chr11:34107562..34107572, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_7c326baff5045da379d5709bce71ac83 | p3@Gm3428 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379550..31379559,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:31379550..31379559, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148676919..148676930,-#_7c326baff5045da379d5709bce71ac83 | p3@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75304900..75304907,+#_7c326baff5045da379d5709bce71ac83 | p@chr15:75304900..75304907, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_7c326baff5045da379d5709bce71ac83 | p@chr13:52712765..52712772, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:35930667..35930691, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr3:146278590..146278595,-#_7c326baff5045da379d5709bce71ac83 | p10@Dnase2b |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21381141..21381155, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_7c326baff5045da379d5709bce71ac83 | p@chr15:54678983..54678995, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_7c326baff5045da379d5709bce71ac83 | p2@Rnase13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_7c326baff5045da379d5709bce71ac83 | p@chr1:168436322..168436326, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_7c326baff5045da379d5709bce71ac83 | p2@Defb23 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:101959159..101959163,+#_7c326baff5045da379d5709bce71ac83 | p@chr11:101959159..101959163, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_7c326baff5045da379d5709bce71ac83 | p@chr2:75866210..75866235, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_7c326baff5045da379d5709bce71ac83 | p@chr7:151928014..151928021, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:123977104..123977120,-#_7c326baff5045da379d5709bce71ac83 | p1@ENSMUST00000139012, p1@uc008uqo.1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_7c326baff5045da379d5709bce71ac83 | p@chr14:103837894..103837900, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51627586..51627595,+#_7c326baff5045da379d5709bce71ac83 | p4@Rnase10 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21378296..21378303,+#_7c326baff5045da379d5709bce71ac83 | p@chr13:21378296..21378303, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:90155966..90155989, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_7c326baff5045da379d5709bce71ac83 | p@chr18:46301295..46301302, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_7c326baff5045da379d5709bce71ac83 | p@chr13:21379065..21379072, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_7c326baff5045da379d5709bce71ac83 | p4@Gm17727 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31377177..31377184,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:31377177..31377184, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_7c326baff5045da379d5709bce71ac83 | p@chr1:39707572..39707583, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:54678902..54678911,-#_7c326baff5045da379d5709bce71ac83 | p@chr15:54678902..54678911, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:103896102..103896116,-#_7c326baff5045da379d5709bce71ac83 | p@chr12:103896102..103896116, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr19:24582739..24582748,-#_7c326baff5045da379d5709bce71ac83 | p@chr19:24582739..24582748, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_7c326baff5045da379d5709bce71ac83 | p11@P4ha2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_7c326baff5045da379d5709bce71ac83 | p4@Atp4a |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_7c326baff5045da379d5709bce71ac83 | p@chr4:106730107..106730125, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_7c326baff5045da379d5709bce71ac83 | p@chr5:31379845..31379855, + |
