UBERON:0011215: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0011215 | |||
|is_a=UBERON:0004121 ;;UBERON:0005162 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=central nervous system cell part cluster | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001017 | |part_of=UBERON:0001017 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="neuraxis layer" EXACT [FMA:83143] | ||
|union_of= | |||
|xref=FMA:83143 | |||
}} | }} | ||
Latest revision as of 18:10, 12 September 2014
| Name: | central nervous system cell part cluster | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "neuraxis layer" EXACT [FMA:83143] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004121(ectoderm-derived structure),UBERON:0005162(multi cell component structure) |
|---|---|
| part_of: | UBERON:0001017(central nervous system) |
Children
| is a: | UBERON:0000125 (neural nucleus),UBERON:0001018 (axon tract),UBERON:0002020 (gray matter),UBERON:0002316 (white matter),UBERON:0005383 (caudate-putamen),UBERON:0016550 (spinal cord column) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10042-101F6 (corpus callosum, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011215 (central nervous system cell part cluster), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_d866ff168bd23f5201f74238197c4ab5 | p@chr15:93827399..93827403, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_d866ff168bd23f5201f74238197c4ab5 | p@chr15:93827399..93827403, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_d866ff168bd23f5201f74238197c4ab5 | p@chr17:73689469..73689476, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_d866ff168bd23f5201f74238197c4ab5 | p@chr14:36462819..36462832, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_d866ff168bd23f5201f74238197c4ab5 | p@chr14:36462819..36462832, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_d866ff168bd23f5201f74238197c4ab5 | p@chr17:73689469..73689476, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_d866ff168bd23f5201f74238197c4ab5 | p3@BC032909, p3@BC032910 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_d866ff168bd23f5201f74238197c4ab5 | p3@BC032909, p3@BC032910 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr14:33926303..33926307,-#_b18c7c6b4f4cdc0e97e996baea30e062 | p@chr14:33926303..33926307, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr14:33926303..33926307,-#_b18c7c6b4f4cdc0e97e996baea30e062 | p@chr14:33926303..33926307, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_b18c7c6b4f4cdc0e97e996baea30e062 | p41@NAV3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_b18c7c6b4f4cdc0e97e996baea30e062 | p41@NAV3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr11:110248322..110248329,-#_b18c7c6b4f4cdc0e97e996baea30e062 | p@chr11:110248322..110248329, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr11:110248322..110248329,-#_b18c7c6b4f4cdc0e97e996baea30e062 | p@chr11:110248322..110248329, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:232548018..232548022,-#_b18c7c6b4f4cdc0e97e996baea30e062 | p@chr2:232548018..232548022, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:232548018..232548022,-#_b18c7c6b4f4cdc0e97e996baea30e062 | p@chr2:232548018..232548022, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:35788742..35788752,+#_5fd835d096472d3957c49a1b116059af | p@chr19:35788742..35788752, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:15374659..15374696,-#_5fd835d096472d3957c49a1b116059af | p10@SH3BP5 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:15374659..15374696,-#_5fd835d096472d3957c49a1b116059af | p10@SH3BP5 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:35788742..35788752,+#_5fd835d096472d3957c49a1b116059af | p@chr19:35788742..35788752, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr17:72823919..72823924,-#_56a433813b6fa808d2f28e5036f40416 | p@chr17:72823919..72823924, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr8:42037488..42037504,+#_56a433813b6fa808d2f28e5036f40416 | p@chr8:42037488..42037504, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr8:42037488..42037504,+#_56a433813b6fa808d2f28e5036f40416 | p@chr8:42037488..42037504, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr7:124391226..124391235,-#_56a433813b6fa808d2f28e5036f40416 | p@chr7:124391226..124391235, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr17:72823919..72823924,-#_56a433813b6fa808d2f28e5036f40416 | p@chr17:72823919..72823924, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr7:124391226..124391235,-#_56a433813b6fa808d2f28e5036f40416 | p@chr7:124391226..124391235, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_56a433813b6fa808d2f28e5036f40416 | p5@C10orf105 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_56a433813b6fa808d2f28e5036f40416 | p32@NAV3 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_56a433813b6fa808d2f28e5036f40416 | p32@NAV3 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_56a433813b6fa808d2f28e5036f40416 | p5@C10orf105 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:163681762..163681767,+#_180249935d4354150d212ea2e3604a6b | p@chr6:163681762..163681767, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:61043452..61043467,-#_180249935d4354150d212ea2e3604a6b | p16@FAM13C |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:163681762..163681767,+#_180249935d4354150d212ea2e3604a6b | p@chr6:163681762..163681767, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:61043452..61043467,-#_180249935d4354150d212ea2e3604a6b | p16@FAM13C |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:25012236..25012245,-#_180249935d4354150d212ea2e3604a6b | p24@ARHGAP21 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:25012236..25012245,-#_180249935d4354150d212ea2e3604a6b | p24@ARHGAP21 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:101522298..101522305,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr8:101522298..101522305, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr17:40120071..40120085,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p15@CNP |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr7:129015806..129015815, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p20@PRLR |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p26@PRLR |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr7:129012882..129012891, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr7:129015806..129015815, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p26@PRLR |
| 4.66e-66 | FFCP PHASE1:Hg19::chr17:40120071..40120085,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p15@CNP |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr7:129012882..129012891, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:174293011..174293022,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr4:174293011..174293022, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:99135698..99135706,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr13:99135698..99135706, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:645709..645712,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p15@PDE6B |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:99135698..99135706,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr13:99135698..99135706, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr14:91199850..91199861,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr14:91199850..91199861, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr14:91199850..91199861,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr14:91199850..91199861, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:174293011..174293022,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr4:174293011..174293022, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:101522298..101522305,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p@chr8:101522298..101522305, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:645709..645712,+#_5a8b0b94a00c8a1f647c9a0b42139341 | p15@PDE6B |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_5a8b0b94a00c8a1f647c9a0b42139341 | p20@PRLR |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:170571770..170571782,-#_04762eed6eb27389421fc2307daf9d32 | p2@LOC154449 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:170571770..170571782,-#_04762eed6eb27389421fc2307daf9d32 | p2@LOC154449 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_324e354df0faa61424bee7944c428ad5 | p@chr4:74005833..74005844, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:7454514..7454525,-#_324e354df0faa61424bee7944c428ad5 | p@chr10:7454514..7454525, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:7454514..7454525,-#_324e354df0faa61424bee7944c428ad5 | p@chr10:7454514..7454525, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr12:106697974..106697990,-#_324e354df0faa61424bee7944c428ad5 | p31@CKAP4 |
| 2.42e-50 | FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_324e354df0faa61424bee7944c428ad5 | p@chrX:103031196..103031205, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr12:106697974..106697990,-#_324e354df0faa61424bee7944c428ad5 | p31@CKAP4 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr19:15751984..15751994,+#_324e354df0faa61424bee7944c428ad5 | p6@CYP4F3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_324e354df0faa61424bee7944c428ad5 | p@chrX:103031196..103031205, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_324e354df0faa61424bee7944c428ad5 | p@chr7:30202318..30202329, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr19:15751984..15751994,+#_324e354df0faa61424bee7944c428ad5 | p6@CYP4F3 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr11:133996343..133996351,+#_324e354df0faa61424bee7944c428ad5 | p8@JAM3 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_324e354df0faa61424bee7944c428ad5 | p@chr4:74005833..74005844, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr11:133996343..133996351,+#_324e354df0faa61424bee7944c428ad5 | p8@JAM3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_324e354df0faa61424bee7944c428ad5 | p@chr7:30202318..30202329, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr9:20927844..20927855, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr17:36726052..36726061, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr17:36726052..36726061, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:45922629..45922637,+#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr11:45922629..45922637, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:45922629..45922637,+#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr11:45922629..45922637, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:164364681..164364684,-#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr6:164364681..164364684, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p8@TRIM59 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr6:164364681..164364684,-#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr6:164364681..164364684, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p8@TRIM59 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_ea4bb0df6c38fb2c2a92e1a3fda2aaa3 | p@chr9:20927844..20927855, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_0164aaffd9d37532da5b3e767ba9d77c | p38@ANKS1B |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_0164aaffd9d37532da5b3e767ba9d77c | p38@ANKS1B |
| 6.58e-50 | FFCP PHASE2:Hg19::chr4:7412700..7412704,+#_0164aaffd9d37532da5b3e767ba9d77c | p@chr4:7412700..7412704, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr6:133119649..133119655,-#_0164aaffd9d37532da5b3e767ba9d77c | p6@C6orf192 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr3:190578500..190578506,-#_0164aaffd9d37532da5b3e767ba9d77c | p@chr3:190578500..190578506, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr4:7412700..7412704,+#_0164aaffd9d37532da5b3e767ba9d77c | p@chr4:7412700..7412704, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr3:10706167..10706179,-#_0164aaffd9d37532da5b3e767ba9d77c | p@chr3:10706167..10706179, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_0164aaffd9d37532da5b3e767ba9d77c | p8@IL1RAPL1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr3:190578500..190578506,-#_0164aaffd9d37532da5b3e767ba9d77c | p@chr3:190578500..190578506, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr3:10706167..10706179,-#_0164aaffd9d37532da5b3e767ba9d77c | p@chr3:10706167..10706179, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chrX:28605300..28605301,+#_0164aaffd9d37532da5b3e767ba9d77c | p8@IL1RAPL1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:67190503..67190512,+#_0164aaffd9d37532da5b3e767ba9d77c | p8@CARNS1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr9:112191163..112191174,-#_0164aaffd9d37532da5b3e767ba9d77c | p10@PTPN3 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:219610931..219610941,+#_0164aaffd9d37532da5b3e767ba9d77c | p13@TTLL4 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_0164aaffd9d37532da5b3e767ba9d77c | p@chr11:117585539..117585541, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr9:112191163..112191174,-#_0164aaffd9d37532da5b3e767ba9d77c | p10@PTPN3 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr11:67190503..67190512,+#_0164aaffd9d37532da5b3e767ba9d77c | p8@CARNS1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr11:117585539..117585541,-#_0164aaffd9d37532da5b3e767ba9d77c | p@chr11:117585539..117585541, - |
