FFCP PHASE1:Hg19::chr19:633508..633568,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:633508..633568,-
|short_description=p1@POLRMT
|description=CAGE_peak_1_at_POLRMT_5end
|association_with_transcript=0bp_to_ENST00000215591,NM_005035,uc002l...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5442 | |EntrezGene=5442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9200 | |HGNC=9200 | ||
|TSSclassifier=strong | |||
|UniProt=O00411,Q4G0F4 | |UniProt=O00411,Q4G0F4 | ||
|association_with_transcript=0bp_to_ENST00000215591,NM_005035,uc002lpf.1_5end | |||
|cluster_id=chr19:633508..633568,- | |||
|description=CAGE_peak_1_at_POLRMT_5end | |||
|id=chr19:633508..633568,- | |||
|ontology_enrichment_celltype=CL:0002321!1.17e-07!248;CL:0000220!3.65e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.13e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.88e-07,309;UBERON:0000483,5.01e-07,306 | |||
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| ||
|short_description=p1@POLRMT | |||
}} | }} |
Latest revision as of 15:19, 24 September 2015
Short description: | p1@POLRMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POLRMT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000215591, NM_005035, uc002lpf.1_5end |
EntrezGene: | POLRMT |
HGNC: | 9200 |
UniProt: | O00411Q4G0F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.13e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cell layer | 2.88e-07 | 309 |
epithelium | 5.01e-07 | 306 |