FFCP PHASE1:Hg19::chr12:118542436..118542448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:118542436..118542448,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr12:118542436..118542448,- | |description=CAGE_peak_at_chr12:118542436..118542448,- | ||
|id=chr12:118542436..118542448,- | |id=chr12:118542436..118542448,- | ||
|ontology_enrichment_celltype=CL:0000039;1.64e-38;7!CL:0000586;1.64e-38;7 | |ontology_enrichment_celltype=CL:0002322!3.68e-38!5;CL:0000039!1.10e-18!7;CL:0000586!1.10e-18!7;CL:0000148!1.96e-07!10;CL:0000541!1.96e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;1.64e-38;7!CL:0000586;1.64e-38;7 | ||
|ontology_enrichment_disease=DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22 | |ontology_enrichment_celltype_v019_2=CL:0000039,1.80e-38,7;CL:0000586,1.80e-38,7 | ||
|ontology_enrichment_uberon=UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0000922;4.38e-07;49!UBERON:0002323;4.41e-07;45 | |ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10!UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | ||
|ontology_enrichment_disease=DOID:4362!4.70e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.01e-13,22;DOID:2994,4.01e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.25e-16!8;UBERON:0003135!5.91e-12!11;UBERON:0003133!2.74e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0000922;4.38e-07;49!UBERON:0002323;4.41e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.68e-34,8;UBERON:0003135,5.49e-25,11;UBERON:0000991,1.09e-13,21;UBERON:0009196,1.09e-13,21;UBERON:0009117,1.09e-13,21;UBERON:0005564,1.09e-13,21;UBERON:0004176,4.01e-13,22;UBERON:0003101,4.01e-13,22;UBERON:0000079,4.01e-13,22;UBERON:0002323,7.52e-07,46 | |||
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|short_description=p@chr12:118542436..118542448,- | |short_description=p@chr12:118542436..118542448,- | ||
}} | }} |
Latest revision as of 05:32, 24 July 2015
Short description: | p@chr12:118542436..118542448, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:118542436..118542448, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.80e-38 | 7 |
germ cell | 1.80e-38 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.68e-34 | 8 |
male reproductive organ | 5.49e-25 | 11 |
gonad | 1.09e-13 | 21 |
indifferent external genitalia | 1.09e-13 | 21 |
indifferent gonad | 1.09e-13 | 21 |
gonad primordium | 1.09e-13 | 21 |
external genitalia | 4.01e-13 | 22 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
body cavity | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.01e-13 | 22 |
germ cell cancer | 4.01e-13 | 22 |