FFCP PHASE1:Hg19::chr1:104113700..104113710,+: Difference between revisions
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|id=chr1:104113700..104113710,+
|short_description=p2@AMY2B
|description=CAGE_peak_2_at_AMY2B_5end
|association_with_transcript=-468bp_to_M24895_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=280 | |EntrezGene=280 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=478 | |HGNC=478 | ||
|TSSclassifier=strong | |||
|UniProt=P19961 | |UniProt=P19961 | ||
|association_with_transcript=-468bp_to_M24895_5end | |||
|cluster_id=chr1:104113700..104113710,+ | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_2_at_AMY2B_5end | |||
|id=chr1:104113700..104113710,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006298;2.42e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.05e-79!2;UBERON:0001044!8.15e-60!6;UBERON:0003293!8.15e-60!6;UBERON:0003294!8.15e-60!6;UBERON:0010047!8.15e-60!6;UBERON:0000167!8.15e-60!6;UBERON:0001831!6.62e-41!1;UBERON:0001567!6.62e-41!1;UBERON:0008801!6.62e-41!1;UBERON:0001736!9.91e-41!1;UBERON:0006298!9.91e-41!1;UBERON:0003408!2.40e-36!10;UBERON:0004089!3.11e-21!2;UBERON:0000078!1.20e-20!18;UBERON:0000166!7.83e-18!21;UBERON:0002771!2.09e-14!3;UBERON:0000165!1.34e-13!28;UBERON:0000930!1.34e-13!28;UBERON:0002365!2.30e-12!31;UBERON:0002330!2.30e-12!31;UBERON:0000161!4.78e-11!35;UBERON:0002553!9.44e-10!70;UBERON:0007023!3.07e-09!115;UBERON:0001444!2.89e-08!48;UBERON:0000200!7.25e-08!6;UBERON:0001041!3.89e-07!98;UBERON:0002530!7.38e-07!59;UBERON:0000464!9.34e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.68e-99;2!UBERON:0001044;2.92e-74;6!UBERON:0003293;2.92e-74;6!UBERON:0003294;2.92e-74;6!UBERON:0010047;2.92e-74;6!UBERON:0003408;2.92e-74;6!UBERON:0000167;2.92e-74;6!UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001736;2.42e-50;1!UBERON:0001041;1.54e-32;14!UBERON:0004089;4.32e-26;2!UBERON:0000161;2.84e-24;19!UBERON:0000166;2.84e-24;19!UBERON:0000165;8.27e-17;28!UBERON:0002365;6.00e-15;31!UBERON:0002330;6.00e-15;31!UBERON:0004921;1.61e-12;33!UBERON:0002553;1.98e-09;52!UBERON:0007811;1.90e-08;52!UBERON:0000153;7.99e-08;54!UBERON:0000033;9.05e-08;50!UBERON:0001555;3.74e-07;54!UBERON:0001444;3.75e-07;48!UBERON:0002530;7.45e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.68e-99,2;UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001736,2.42e-50,1;UBERON:0006298,2.42e-50,1;UBERON:0003408,4.18e-45,10;UBERON:0004089,4.32e-26,2;UBERON:0000166,3.99e-21,22;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002553,7.99e-14,61;UBERON:0000161,2.66e-13,36;UBERON:0001444,5.14e-10,49;UBERON:0000033,7.15e-09,56;UBERON:0002530,1.83e-08,59;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62;UBERON:0007023,8.86e-08,114;UBERON:0001004,6.51e-07,74 | |||
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|short_description=p2@AMY2B | |||
}} | }} |
Latest revision as of 06:40, 25 September 2015
Short description: | p2@AMY2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AMY2B_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -468bp_to_M24895_5end |
EntrezGene: | AMY2B |
HGNC: | 478 |
UniProt: | P19961 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.68e-99 | 2 |
saliva-secreting gland | 2.58e-74 | 6 |
gland of oral region | 2.58e-74 | 6 |
gland of foregut | 2.58e-74 | 6 |
oral gland | 2.58e-74 | 6 |
oral cavity | 2.58e-74 | 6 |
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
submandibular gland | 2.42e-50 | 1 |
submandibular gland primordium | 2.42e-50 | 1 |
gland of gut | 4.18e-45 | 10 |
midface | 4.32e-26 | 2 |
oral opening | 3.99e-21 | 22 |
mouth | 2.82e-16 | 29 |
stomodeum | 2.82e-16 | 29 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
anatomical cavity | 7.99e-14 | 61 |
orifice | 2.66e-13 | 36 |
subdivision of head | 5.14e-10 | 49 |
head | 7.15e-09 | 56 |
gland | 1.83e-08 | 59 |
anterior region of body | 4.28e-08 | 62 |
craniocervical region | 4.28e-08 | 62 |
adult organism | 8.86e-08 | 114 |
respiratory system | 6.51e-07 | 74 |