FFCP PHASE1:Hg19::chr17:43685905..43685910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31329 | |HGNC=31329 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536258_5end | |association_with_transcript=0bp_to_ENST00000536258_5end | ||
|cluster_id=chr17:43685905..43685910,+ | |||
|description=CAGE_peak_1_at_RPS26P8_5end | |description=CAGE_peak_1_at_RPS26P8_5end | ||
|id=chr17:43685905..43685910,+ | |id=chr17:43685905..43685910,+ | ||
|ontology_enrichment_celltype=CL:0002588;8.49e-17;2!CL:0000037;4.90e-09;1!CL:0001024;4.90e-09;1!CL:0002566;4.90e-09;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002588;8.49e-17;2!CL:0000037;4.90e-09;1!CL:0001024;4.90e-09;1!CL:0002566;4.90e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002588,6.23e-17,2;CL:0001024,2.04e-09,1;CL:0002566,5.75e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.59e-09;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;3.40e-30;9!UBERON:0001557;3.40e-30;9!UBERON:0002066;3.05e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!9.44e-12!9;UBERON:0001557!5.31e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.40e-30;9!UBERON:0001557;3.40e-30;9!UBERON:0002066;3.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.19e-30,9;UBERON:0001557,5.28e-14,19;UBERON:0002066,2.70e-07,5;UBERON:0008947,9.28e-07,38;UBERON:0003258,9.28e-07,38 | |||
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| ||
|short_description=p1@RPS26P8 | |short_description=p1@RPS26P8 | ||
}} | }} |
Latest revision as of 01:59, 25 September 2015
Short description: | p1@RPS26P8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS26P8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536258_5end |
EntrezGene: | NA |
HGNC: | 31329 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 6.23e-17 | 2 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.04e-09 | 1 |
dark melanocyte | 5.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.19e-30 | 9 |
upper respiratory tract | 5.28e-14 | 19 |
umbilical vein | 2.70e-07 | 5 |
respiratory primordium | 9.28e-07 | 38 |
endoderm of foregut | 9.28e-07 | 38 |