FFCP PHASE1:Hg19::chr1:107599280..107599340,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:107599280..107599340,+
|short_description=p1@PRMT6
|description=CAGE_peak_1_at_PRMT6_5end
|association_with_transcript=0bp_to_ENST00000370078,ENST000005403...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55170 | |EntrezGene=55170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18241 | |HGNC=18241 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LA8,B4DNF6 | |UniProt=Q96LA8,B4DNF6 | ||
|association_with_transcript=0bp_to_ENST00000370078,ENST00000540389_5end | |||
|cluster_id=chr1:107599280..107599340,+ | |||
|description=CAGE_peak_1_at_PRMT6_5end | |||
|id=chr1:107599280..107599340,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.34e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.68e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002104;7.05e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.49e-07,86;UBERON:0003075,3.71e-07,82;UBERON:0007284,3.71e-07,82;UBERON:0003056,9.08e-07,61 | |||
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| ||
|short_description=p1@PRMT6 | |||
}} | }} |
Latest revision as of 07:33, 25 September 2015
Short description: | p1@PRMT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRMT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370078, ENST00000540389_5end |
EntrezGene: | PRMT6 |
HGNC: | 18241 |
UniProt: | Q96LA8B4DNF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.68e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.49e-07 | 86 |
neural plate | 3.71e-07 | 82 |
presumptive neural plate | 3.71e-07 | 82 |
pre-chordal neural plate | 9.08e-07 | 61 |