FFCP PHASE1:Hg19::chr7:142494840..142494850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_uc003wbm.3_5end | |association_with_transcript=31bp_to_uc003wbm.3_5end | ||
|cluster_id=chr7:142494840..142494850,+ | |||
|description=CAGE_peak_1_at_uc003wbm.3_5end | |description=CAGE_peak_1_at_uc003wbm.3_5end | ||
|id=chr7:142494840..142494850,+ | |id=chr7:142494840..142494850,+ | ||
|ontology_enrichment_celltype=CL:0000236;1.28e-17;13!CL:0000542;5.34e-12;53!CL:0000945;1.74e-09;24 | |ontology_enrichment_celltype=CL:0000542!3.45e-33!53;CL:0000051!3.45e-33!53;CL:0000838!9.54e-32!52;CL:0000084!8.76e-25!25;CL:0000827!8.76e-25!25;CL:0000791!3.77e-21!18;CL:0000789!3.77e-21!18;CL:0002420!3.77e-21!18;CL:0002419!3.77e-21!18;CL:0000790!3.77e-21!18;CL:0002087!6.42e-13!119;CL:0000625!3.71e-11!11;CL:0000738!1.09e-10!140;CL:0000624!2.09e-10!6;CL:0002031!1.25e-09!124;CL:0000236!5.84e-09!14;CL:0000988!7.76e-09!182;CL:0000945!9.01e-09!24;CL:0000826!9.01e-09!24;CL:0000037!2.90e-08!172;CL:0000566!2.90e-08!172;CL:0002032!2.06e-07!165;CL:0000837!2.06e-07!165 | ||
| | |ontology_enrichment_celltype_v019=CL:0000236;1.28e-17;13!CL:0000542;5.34e-12;53!CL:0000945;1.74e-09;24 | ||
|ontology_enrichment_disease=DOID:12603;2.07e-10;1 | |ontology_enrichment_celltype_v019_2=CL:0000236,1.94e-16,14;CL:0000542,9.93e-16,53;CL:0000051,9.93e-16,53;CL:0000838,5.40e-13,52;CL:0000945,1.56e-09,24;CL:0000826,1.56e-09,24 | ||
|ontology_enrichment_uberon=UBERON:0002370;1.63e-19;2!UBERON:0005058;1.63e-19;2!UBERON:0009113;1.63e-19;2!UBERON:0004177;2.36e-08;5!UBERON:0005057;2.36e-08;5 | |ontology_enrichment_development_v019=CL:0000051;5.34e-12;53 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;2.07e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.08e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.12e-08!7;UBERON:0002370!8.00e-08!4;UBERON:0005058!8.00e-08!4;UBERON:0009113!8.00e-08!4;UBERON:0003295!8.00e-08!4;UBERON:0005562!8.00e-08!4;UBERON:0000178!4.20e-07!15;UBERON:0000179!4.20e-07!15;UBERON:0000463!4.20e-07!15;UBERON:0002066!5.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.63e-19;2!UBERON:0005058;1.63e-19;2!UBERON:0009113;1.63e-19;2!UBERON:0004177;2.36e-08;5!UBERON:0005057;2.36e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.16e-10,4;UBERON:0005058,3.16e-10,4;UBERON:0009113,3.16e-10,4;UBERON:0003295,3.16e-10,4;UBERON:0005562,3.16e-10,4;UBERON:0003351,4.26e-07,6 | |||
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| ||
|short_description=p1@uc003wbm.3 | |short_description=p1@uc003wbm.3 | ||
}} | }} |
Latest revision as of 06:58, 31 July 2015
Short description: | p1@uc003wbm.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003wbm.3_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_uc003wbm.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.94e-16 | 14 |
lymphocyte | 9.93e-16 | 53 |
common lymphoid progenitor | 9.93e-16 | 53 |
lymphoid lineage restricted progenitor cell | 5.40e-13 | 52 |
lymphocyte of B lineage | 1.56e-09 | 24 |
pro-B cell | 1.56e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.16e-10 | 4 |
hemolymphoid system gland | 3.16e-10 | 4 |
thymic region | 3.16e-10 | 4 |
pharyngeal gland | 3.16e-10 | 4 |
thymus primordium | 3.16e-10 | 4 |
pharyngeal epithelium | 4.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.08e-10 | 1 |