FFCP PHASE1:Hg19::chr12:78224442..78224455,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89795 | |EntrezGene=89795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |HGNC=15998 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZV4 | |UniProt=F8VZV4 | ||
|association_with_transcript=-229bp_to_ENST00000549464_5end | |association_with_transcript=-229bp_to_ENST00000549464_5end | ||
|cluster_id=chr12:78224442..78224455,+ | |||
|description=CAGE_peak_26_at_NAV3_5end | |description=CAGE_peak_26_at_NAV3_5end | ||
|id=chr12:78224442..78224455,+ | |id=chr12:78224442..78224455,+ | ||
|ontology_enrichment_celltype=CL:0000083;5.56e-26;4 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000083;5.56e-26;4 | ||
|ontology_enrichment_disease=DOID:4929;2.74e-50;2!DOID:1793;5.56e-26;4!DOID:170;7.67e-18;6 | |ontology_enrichment_celltype_v019_2=CL:0000083,5.56e-26,4 | ||
|ontology_enrichment_uberon=UBERON:0001264;2.73e-11;10!UBERON:0002075;7.18e-07;18 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!1.09e-07!2;DOID:154!1.83e-07!2;DOID:4236!1.83e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;2.74e-50;2!DOID:1793;5.56e-26;4!DOID:170;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.74e-50,2;DOID:1793,5.56e-26,4;DOID:170,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.15e-24!57;UBERON:0005068!1.15e-24!57;UBERON:0006241!1.15e-24!57;UBERON:0007135!1.15e-24!57;UBERON:0002780!2.29e-24!41;UBERON:0001890!2.29e-24!41;UBERON:0006240!2.29e-24!41;UBERON:0003080!1.12e-23!42;UBERON:0002616!2.19e-21!59;UBERON:0000955!9.43e-21!69;UBERON:0006238!9.43e-21!69;UBERON:0007023!1.87e-20!115;UBERON:0005743!3.05e-20!86;UBERON:0001017!6.74e-20!82;UBERON:0002346!2.47e-19!90;UBERON:0003075!6.53e-19!86;UBERON:0007284!6.53e-19!86;UBERON:0000073!1.09e-17!94;UBERON:0001016!1.09e-17!94;UBERON:0003056!1.79e-16!61;UBERON:0001893!6.11e-16!34;UBERON:0001869!8.26e-15!32;UBERON:0002791!3.23e-14!33;UBERON:0002020!8.00e-14!34;UBERON:0003528!8.00e-14!34;UBERON:0001894!1.20e-11!7;UBERON:0006222!1.20e-11!7;UBERON:0000153!3.13e-10!129;UBERON:0007811!3.13e-10!129;UBERON:0000033!5.37e-10!123;UBERON:0000924!6.95e-10!173;UBERON:0006601!6.95e-10!173;UBERON:0004121!1.90e-09!169;UBERON:0002619!3.72e-09!22;UBERON:0002420!2.40e-08!9;UBERON:0007245!2.40e-08!9;UBERON:0010009!2.40e-08!9;UBERON:0010011!2.40e-08!9;UBERON:0000454!2.40e-08!9;UBERON:0002308!2.52e-08!9;UBERON:0000125!2.52e-08!9;UBERON:0000025!3.10e-08!194;UBERON:0003296!3.34e-08!4;UBERON:0010133!3.34e-08!4;UBERON:0001950!4.44e-08!20;UBERON:0000956!6.55e-08!25;UBERON:0000203!6.55e-08!25;UBERON:0000007!1.17e-07!2;UBERON:0001897!2.44e-07!2;UBERON:0000119!2.59e-07!312;UBERON:0009663!4.53e-07!7;UBERON:0000369!4.56e-07!4;UBERON:0002435!4.56e-07!4;UBERON:0000204!4.56e-07!4;UBERON:0010082!4.56e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;2.73e-11;10!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.73e-11,10;UBERON:0002075,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.688992370603241,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.124192805882767,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.464965701472501,2.60787408453869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23370727583713,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.688992370603241,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.124192805882767,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.464965701472501,2.60787408453869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23370727583713,0,0,0,0,0,0 | ||
|short_description=p26@NAV3 | |short_description=p26@NAV3 | ||
}} | }} |
Latest revision as of 22:24, 24 September 2015
Short description: | p26@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_NAV3_5end |
Coexpression cluster: | NA |
Association with transcript: | -229bp_to_ENST00000549464_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | F8VZV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.74e-50 | 2 |
pancreatic cancer | 5.56e-26 | 4 |
endocrine gland cancer | 7.67e-18 | 6 |