FFCP PHASE1:Hg19::chr1:204082201..204082205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9580 | |EntrezGene=9580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11192 | |HGNC=11192 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UN79 | |UniProt=Q9UN79 | ||
|association_with_transcript=157bp_to_AB587365,AF098915,EU446691_5end | |association_with_transcript=157bp_to_AB587365,AF098915,EU446691_5end | ||
|cluster_id=chr1:204082201..204082205,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_13_at_SOX13_5end | |description=CAGE_peak_13_at_SOX13_5end | ||
|id=chr1:204082201..204082205,+ | |id=chr1:204082201..204082205,+ | ||
|ontology_enrichment_celltype=CL:0000097;2.24e-71;5!CL:0000163;3.55e-40;9!CL:0002592;1.96e-14;3!CL:0000151;8.48e-11;36 | |ontology_enrichment_celltype=CL:0000039!2.72e-13!7;CL:0000586!2.72e-13!7;CL:0002274!6.94e-13!5;CL:0000457!6.94e-13!5;CL:0002191!6.94e-13!5;CL:0000097!6.94e-13!5;CL:0000831!6.94e-13!5;CL:0002028!6.94e-13!5;CL:0000163!3.92e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;2.24e-71;5!CL:0000163;3.55e-40;9!CL:0002592;1.96e-14;3!CL:0000151;8.48e-11;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.52e-71,5;CL:0002028,2.52e-71,5;CL:0000163,3.80e-40,9;CL:0002592,1.83e-14,3;CL:0000151,9.84e-11,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003498;1.96e-14;3!UBERON:0005985;1.96e-14;3!UBERON:0001621;1.96e-14;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;1.96e-14;3!UBERON:0005985;1.96e-14;3!UBERON:0001621;1.96e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.83e-14,3;UBERON:0003498,3.22e-09,5;UBERON:0005985,3.22e-09,5 | |||
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| ||
|short_description=p13@SOX13 | |short_description=p13@SOX13 | ||
}} | }} |
Latest revision as of 00:15, 20 September 2015
Short description: | p13@SOX13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SOX13_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 157bp_to_AB587365, AF098915, EU446691_5end |
EntrezGene: | SOX13 |
HGNC: | 11192 |
UniProt: | Q9UN79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.52e-71 | 5 |
basophil mast progenitor cell | 2.52e-71 | 5 |
endocrine cell | 3.80e-40 | 9 |
smooth muscle cell of the coronary artery | 1.83e-14 | 3 |
secretory cell | 9.84e-11 | 36 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.83e-14 | 3 |
heart blood vessel | 3.22e-09 | 5 |
coronary vessel | 3.22e-09 | 5 |