FFCP PHASE1:Hg19::chr10:126138622..126138638,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390010 | |EntrezGene=390010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31652 | |HGNC=31652 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2X8,Q9UD57 | |UniProt=G3V2X8,Q9UD57 | ||
|association_with_transcript=-72bp_to_ENST00000440536,NM_001146340,uc010quf.1_5end | |association_with_transcript=-72bp_to_ENST00000440536,NM_001146340,uc010quf.1_5end | ||
|cluster_id=chr10:126138622..126138638,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_2_at_NKX1-2_5end | |description=CAGE_peak_2_at_NKX1-2_5end | ||
|id=chr10:126138622..126138638,- | |id=chr10:126138622..126138638,- | ||
|ontology_enrichment_celltype=CL:0002322;7.01e-32;5!CL:0000540;7.77e-11;6!CL:0000404;7.77e-11;6!CL:0002321;1.54e-10;15!CL:0000039;2.14e-09;7!CL:0000586;2.14e-09;7 | |ontology_enrichment_celltype=CL:0000066!2.42e-16!254;CL:0002076!6.85e-16!43;CL:0000223!8.82e-16!59;CL:0002322!5.91e-13!5;CL:0002231!2.49e-07!3;CL:0002251!4.04e-07!21;CL:0002321!8.15e-07!248 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;7.01e-32;5!CL:0000540;7.77e-11;6!CL:0000404;7.77e-11;6!CL:0002321;1.54e-10;15!CL:0000039;2.14e-09;7!CL:0000586;2.14e-09;7 | ||
|ontology_enrichment_disease=DOID:3151;6.97e-08;1!DOID:3149;6.97e-08;1!DOID:1749;1.02e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0002322,1.18e-31,5;CL:0000540,7.77e-11,6;CL:0000031,7.77e-11,6;CL:0000404,7.77e-11,6;CL:0000039,2.05e-09,7;CL:0000586,2.05e-09,7;CL:0000047,3.08e-08,8;CL:0000066,5.24e-08,253;CL:0000221,5.06e-07,72 | ||
|ontology_enrichment_uberon=UBERON:0000473;2.83e-08;8 | |ontology_enrichment_development_v019=UBERON:0009117;6.21e-11;10!UBERON:0005564;6.21e-11;10!CL:0000031;7.77e-11;6 | ||
|ontology_enrichment_disease=DOID:1749!4.18e-15!14;DOID:305!3.64e-14!106;DOID:0050687!5.10e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;6.97e-08;1!DOID:3149;6.97e-08;1!DOID:1749;1.02e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.70e-08,1;DOID:3149,5.70e-08,1;DOID:305,7.38e-08,106;DOID:1749,1.16e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!2.97e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.83e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.73e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,2.31750041646231,2.12047629314376,1.2781333715647,1.65857688024593,2.01856680700503,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,1.97550513735526,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,0.141775097242386,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.40607764363942,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,1.1249555075237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09656413827799,2.79679015322043,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0.697118721393016,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,1.36965233252463,0.242780379534093,0,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0.284609546029793,0,1.73559738335131,0.0979923974143777,2.00236175134926,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.320635281006135,0,0,0.72045208577053,0.343609788497747,1.20116498503375,0,0,0.235694034616795,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,6.26937279013575,4.40126197111148,4.56984371832104,0,0,0,2.34804281319486,0,0,0,0.179287339332845,2.30298236783334,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0.322951291263702,0,0,0.11796972334774,0.550285795565037,0.346576998451015,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,3.31320280605688,0.0679914901909147,0,0,0,0,0,1.00933139868063,0.437062287854782,0.253397002022874,7.54717340090665,5.87878291584233,4.96232457488162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,2.31750041646231,2.12047629314376,1.2781333715647,1.65857688024593,2.01856680700503,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,1.97550513735526,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,0.141775097242386,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.40607764363942,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,3.25030123018261,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,1.1249555075237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09656413827799,2.79679015322043,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0.697118721393016,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,1.36965233252463,0.242780379534093,0,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0.284609546029793,0,1.73559738335131,0.0979923974143777,2.00236175134926,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.320635281006135,0,0,0.72045208577053,0.343609788497747,1.20116498503375,0,0,0.235694034616795,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0.0984274815147488,0,0,0,6.26937279013575,4.40126197111148,4.56984371832104,0,0,0,2.34804281319486,0,0,0,0.179287339332845,2.30298236783334,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0.322951291263702,0,0,0.11796972334774,0.550285795565037,0.346576998451015,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,3.31320280605688,0.0679914901909147,0,0,0,0,0,1.00933139868063,0.437062287854782,0.253397002022874,7.54717340090665,5.87878291584233,4.96232457488162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@NKX1-2 | |short_description=p2@NKX1-2 | ||
}} | }} |
Latest revision as of 22:15, 16 September 2015
Short description: | p2@NKX1-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX1-2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -72bp_to_ENST00000440536, NM_001146340, uc010quf.1_5end |
EntrezGene: | NKX1-2 |
HGNC: | 31652 |
UniProt: | G3V2X8Q9UD57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.18e-31 | 5 |
neuron | 7.77e-11 | 6 |
neuroblast | 7.77e-11 | 6 |
electrically signaling cell | 7.77e-11 | 6 |
germ line cell | 2.05e-09 | 7 |
germ cell | 2.05e-09 | 7 |
neuronal stem cell | 3.08e-08 | 8 |
epithelial cell | 5.24e-08 | 253 |
ectodermal cell | 5.06e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 2.73e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.70e-08 | 1 |
keratoacanthoma | 5.70e-08 | 1 |
carcinoma | 7.38e-08 | 106 |
squamous cell carcinoma | 1.16e-07 | 14 |