FFCP PHASE1:Hg19::chr1:153963265..153963267,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:153963265..153963267,+
|short_description=p2@RPS27
|description=CAGE_peak_2_at_RPS27_5end
|association_with_transcript=26bp_to_ENST00000477151,ENST00000493...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6232 | |EntrezGene=6232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10416 | |HGNC=10416 | ||
|TSSclassifier=strong | |||
|UniProt=P42677,Q5T4L6 | |UniProt=P42677,Q5T4L6 | ||
|association_with_transcript=26bp_to_ENST00000477151,ENST00000493224,NM_001030,uc001fdv.2_5end | |||
|cluster_id=chr1:153963265..153963267,+ | |||
|description=CAGE_peak_2_at_RPS27_5end | |||
|id=chr1:153963265..153963267,+ | |||
|ontology_enrichment_celltype=CL:0000144!2.31e-10!625;CL:0002371!2.00e-09!591;CL:0000222!3.17e-09!119;CL:0000048!2.42e-08!430;CL:0000003!4.98e-08!722;CL:0000723!5.47e-08!436;CL:0000012!1.17e-07!682;CL:0000034!1.21e-07!444;CL:0000548!3.08e-07!679;CL:0000004!3.08e-07!679;CL:0000255!3.08e-07!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.39e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.63e-10!79;UBERON:0007798!7.63e-10!79;UBERON:0000055!2.96e-09!69;UBERON:0001981!1.39e-07!60;UBERON:0007500!1.39e-07!60;UBERON:0004537!1.39e-07!60;UBERON:0006965!1.39e-07!60;UBERON:0001637!1.65e-07!42;UBERON:0003509!1.65e-07!42;UBERON:0004572!1.65e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.77e-08,78;UBERON:0007798,1.77e-08,78;UBERON:0000055,2.00e-08,68;UBERON:0007500,2.09e-07,59;UBERON:0001981,2.09e-07,59;UBERON:0004537,2.09e-07,59;UBERON:0006965,2.09e-07,59;UBERON:0004872,6.28e-07,83 | |||
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| ||
|short_description=p2@RPS27 | |||
}} | }} |
Latest revision as of 08:18, 17 September 2015
Short description: | p2@RPS27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS27_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000477151, ENST00000493224, NM_001030, uc001fdv.2_5end |
EntrezGene: | RPS27 |
HGNC: | 10416 |
UniProt: | P42677Q5T4L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.39e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.77e-08 | 78 |
vascular system | 1.77e-08 | 78 |
vessel | 2.00e-08 | 68 |
epithelial tube open at both ends | 2.09e-07 | 59 |
blood vessel | 2.09e-07 | 59 |
blood vasculature | 2.09e-07 | 59 |
vascular cord | 2.09e-07 | 59 |
splanchnic layer of lateral plate mesoderm | 6.28e-07 | 83 |