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FFCP PHASE1:Hg19::chr1:154943559..154943605,-: Difference between revisions

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(Created page with "{{FFCP |id=chr1:154943559..154943605,- |short_description=p7@SHC1 |description=CAGE_peak_7_at_SHC1_5end |association_with_transcript=-336bp_to_ENST00000368449,ENST00000448...")
 
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{{FFCP
{{FFCP
|id=chr1:154943559..154943605,-
|DHSsupport=supported 
|short_description=p7@SHC1
|DPIdataset=robust
|description=CAGE_peak_7_at_SHC1_5end
|association_with_transcript=-336bp_to_ENST00000368449,ENST00000448116,NM_001130040,NM_183001,uc001ffv.2,uc001ffw.2_5end
|EntrezGene=6464
|EntrezGene=6464
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=10840
|HGNC=10840
|TSSclassifier=strong
|UniProt=P29353
|UniProt=P29353
|association_with_transcript=-336bp_to_ENST00000368449,ENST00000448116,NM_001130040,NM_183001,uc001ffv.2,uc001ffw.2_5end
|cluster_id=chr1:154943559..154943605,-
|description=CAGE_peak_7_at_SHC1_5end
|id=chr1:154943559..154943605,-
|ontology_enrichment_celltype=CL:0000055!1.37e-27!180;CL:0002321!1.74e-16!248;CL:0000220!6.04e-16!246;CL:0000057!3.67e-15!75;CL:0000222!2.09e-12!119;CL:0000548!4.15e-09!679;CL:0000004!4.15e-09!679;CL:0000255!4.15e-09!679;CL:0000012!1.64e-08!682;CL:0000183!6.65e-08!59;CL:0000680!1.05e-07!57;CL:0000056!1.05e-07!57;CL:0000355!1.05e-07!57;CL:0000393!1.71e-07!60;CL:0000211!1.71e-07!60;CL:0000144!2.27e-07!625;CL:0002620!3.38e-07!23;CL:0000187!6.70e-07!54
|ontology_enrichment_celltype_v019=CL:0002620;1.96e-07;23!CL:0002319;5.69e-07;25
|ontology_enrichment_celltype_v019_2=CL:0000057,4.39e-13,76;CL:0002321,2.25e-09,250;CL:0000222,8.61e-08,121;CL:0002620,1.42e-07,23;CL:0002319,4.24e-07,25;CL:0000133,4.45e-07,59
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000475!6.91e-10!365;UBERON:0002049!3.83e-09!79;UBERON:0007798!3.83e-09!79;UBERON:0000914!5.97e-09!83;UBERON:0002329!5.97e-09!83;UBERON:0003077!5.97e-09!83;UBERON:0003059!5.97e-09!83;UBERON:0007282!5.97e-09!83;UBERON:0009618!5.97e-09!83;UBERON:0007285!5.97e-09!83;UBERON:0004290!1.12e-08!70;UBERON:0000486!3.42e-08!82;UBERON:0000468!3.87e-08!659;UBERON:0002100!1.14e-07!216;UBERON:0003102!1.24e-07!95;UBERON:0002199!2.40e-07!45;UBERON:0002416!2.40e-07!45;UBERON:0000055!5.03e-07!69;UBERON:0001134!5.20e-07!61;UBERON:0002036!5.20e-07!61;UBERON:0003082!5.20e-07!61;UBERON:0005256!5.36e-07!143;UBERON:0002097!6.57e-07!40;UBERON:0004535!9.00e-07!110
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.47e-07,78
|phase1_expression=0.54503513781167,2.14100523890983,1.12763523276777,0,0.446961094427288,1.74467704820074,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,1.39560233594486,0.436882744260345,0.263766978228454,0.990130823680373,0,1.34465029290355,3.01347264011988,0,1.46379839637152,2.46242116153576,2.65200898617529,2.82109249330279,0,1.23186982565596,0,0,0,0.157421562627358,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0.670700859703636,0.12786256184353,1.44575660953827,1.00267582127178,0.869079113764942,0.795285947051099,0.973269740605272,0.661743720148475,0.665188192387692,1.49319135678314,0.261958150995425,1.09288586487763,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0.56530794192401,0.419499436209906,1.37559020970034,0.208994966536811,1.03366703667732,1.06729878806013,0.66944122552934,0.805658634218294,0.760272105718513,0.24406205754817,0.735326160691737,2.43042584364528,0.803697554556718,0.673588117878509,0.563057402416611,4.5994991239765,0.949265659568129,0.549605231791222,0,0,0.872188104285069,1.49091585508596,0.886413581652058,4.10468460520978,4.01571269048339,0.709336764396714,1.68203280042692,1.06748995729705,0.24666754841716,1.24484414159907,1.0776853765575,1.14423332179421,1.21085942115945,0.576175924479999,0.234321431833797,0.624320153660641,0,0.896692083310806,1.29177948508141,2.26622122115384,2.52811452064047,1.22492502752936,0.737005903870608,1.96318984233954,0,0.741800787835671,3.64064544775211,2.15585442544872,0.841680569770331,1.25118519871964,1.10825646193673,2.63386572528503,0.919463387397059,0.45071417671979,0.226864366320042,3.58779271377724,1.2813443329114,0.847727604638247,4.80145753735044,2.06105058476878,8.50213782150576,1.67505170698431,1.85653965465393,1.75386609290158,3.78650661366172,1.19664868234989,0.80823028409406,4.9701342952326,0.705264687593482,1.01736355386293,0.386521706326594,0,0.573609190778008,1.58565817968474,1.19276791489337,1.16193942869518,0.621966330092223,1.00928340350251,1.45990943630332,3.12899064659632,1.28648187638577,1.38134921352481,1.39310378409594,1.44375896333917,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,1.17732879075208,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0,1.20097467208968,0.768251997860379,1.1240175325762,0.703702806881416,0.370353780634118,0.977424915930974,4.15973914111831,1.44331342025273,0.231860809950154,0.469634776943287,1.01056513432752,0.925971025153221,0.570762456703795,0.790204397959275,0,0,0,0,0,0.671928512795438,0,0.716468181622786,0.871901815541886,0,0,0.088048434013226,0,0.144119953416961,0,0,0.381988425558278,0,1.71072446022705,0,0.300343057843917,0.285826432630578,0.784917590417525,1.74384027533312,0.66004457238855,1.29271715757778,0,0,1.59562869950922,2.08014873822732,2.05765899409714,1.41849132023278,2.93064396917709,1.00084595560703,1.62786481617433,4.93944202068461,0.325736184293735,0.710783897485092,0.791951872933429,0.602878754119172,0,1.09970290300263,0,0,0,0.718874566474748,0,0,1.15825045334063,1.64381058040307,1.43248770591916,0,0,0.215627574859517,0.128343036279748,1.27047312111232,0,0,0,1.27587750330633,0,0,0.414415513436035,1.10422342547226,1.00034104211935,0.813795071099207,2.9115920614313,3.03329280955175,2.20783381047509,0.819989904948992,0.601892199455438,4.5481500811197,0,0.664225598535437,0,1.47702144595741,1.95801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,1.24053903909388,1.99500565274481,0.280660094433074,1.40953064181271,1.02341449813341,0.804269605718038,1.48418066444991,0.616838775210622,0.532685175939381,0.98552587216571,0,1.62694529843943,0,0.601519410909855,0.460404944679482,0.459257792658427,1.27463817604702,1.04899531967539,0.451199612907412,0.462092022626489,1.56869953835371,0,0.316654886678627,0,2.2112181685947,0.431831832204279,1.54227252690289,1.08378575017541,1.00337954770971,0.509752546090077,0,0.671624264166535,0,0,0.256450125116389,1.31205858279882,0,0,3.20493126864202,2.80532299729999,0.574265537996172,0,0,1.54673149267395,1.54048617114644,1.84204409671355,2.06754858726796,0.966782203814463,2.17525040871343,0.767039646744908,0.712256285173899,0.165284915360978,0.768760269460425,3.44554323735377,0.6069466851333,0.464845549297286,4.40737285562896,0.6970372701606,0,0.532306030317022,2.60979897622522,0.37064843820784,1.14499909393593,1.116475108079,0.632758849437452,0.38126038784765,1.535386747868,1.28381696410176,0.636406495851874,1.56989728039846,0.359744915166629,1.37268514868027,0.824686816419805,0.808729926293264,0,0.842516912477962,0,0.974853958525138,1.05650146756755,1.09199929126389,0.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|short_description=p7@SHC1
}}
}}

Latest revision as of 10:49, 17 September 2015

Short description:p7@SHC1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_SHC1_5end
Coexpression cluster:NA
Association with transcript: -336bp_to_ENST00000368449, ENST00000448116, NM_001130040, NM_183001, uc001ffv.2, uc001ffw.2_5end
EntrezGene:SHC1
HGNC: 10840
UniProt: P29353
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data