FFCP PHASE1:Hg19::chr8:27529996..27530008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:27529996..27530008,+ | |||
|description=CAGE_peak_at_chr8:27529996..27530008,+ | |description=CAGE_peak_at_chr8:27529996..27530008,+ | ||
|id=chr8:27529996..27530008,+ | |id=chr8:27529996..27530008,+ | ||
|ontology_enrichment_celltype=CL:0002583;4.66e-20;2!CL:0000138;1.18e-14;6!CL:0000135;3.41e-14;3!CL:0000388;3.41e-14;3!CL:0002582;4.87e-14;3!CL:0002334;3.98e-13;12!CL:0000153;5.89e-10;9!CL:0000447;5.89e-10;9!CL:0000499;1.92e-08;28 | |ontology_enrichment_celltype=CL:0000057!2.54e-10!75;CL:0000055!7.05e-10!180;CL:0002620!4.22e-07!23;CL:0002334!4.37e-07!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0002583;4.66e-20;2!CL:0000138;1.18e-14;6!CL:0000135;3.41e-14;3!CL:0000388;3.41e-14;3!CL:0002582;4.87e-14;3!CL:0002334;3.98e-13;12!CL:0000153;5.89e-10;9!CL:0000447;5.89e-10;9!CL:0000499;1.92e-08;28 | ||
|ontology_enrichment_disease=DOID:0060084;1.06e-13;3!DOID:127;1.06e-13;3!DOID:0060072;1.65e-10;4 | |ontology_enrichment_celltype_v019_2=CL:0002583,4.90e-20,2;CL:0000058,1.43e-14,6;CL:0000138,1.43e-14,6;CL:0000135,3.64e-14,3;CL:0000388,3.64e-14,3;CL:0002582,4.42e-14,3;CL:0002334,3.86e-13,12;CL:0000153,6.67e-10,9;CL:0000447,6.67e-10,9;CL:0000499,2.08e-08,28 | ||
|ontology_enrichment_uberon=UBERON:0007846;3.41e-14;3!UBERON:0000043;3.41e-14;3!UBERON:0007845;3.41e-14;3!UBERON:0002072;1.40e-08;5 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.06e-13;3!DOID:127;1.06e-13;3!DOID:0060072;1.65e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.24e-13,3;DOID:127,1.24e-13,3;DOID:0060072,1.86e-10,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.41e-14;3!UBERON:0000043;3.41e-14;3!UBERON:0007845;3.41e-14;3!UBERON:0002072;1.40e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.64e-14,3;UBERON:0000043,3.64e-14,3;UBERON:0007845,3.64e-14,3;UBERON:0002072,1.43e-08,5 | |||
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| ||
|short_description=p@chr8:27529996..27530008,+ | |short_description=p@chr8:27529996..27530008,+ | ||
}} | }} |
Latest revision as of 17:39, 31 July 2015
Short description: | p@chr8:27529996..27530008, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:27529996..27530008, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 4.90e-20 | 2 |
chondroblast | 1.43e-14 | 6 |
chondrocyte | 1.43e-14 | 6 |
fibrocyte | 3.64e-14 | 3 |
tendon cell | 3.64e-14 | 3 |
visceral preadipocyte | 4.42e-14 | 3 |
preadipocyte | 3.86e-13 | 12 |
GAG secreting cell | 6.67e-10 | 9 |
carbohydrate secreting cell | 6.67e-10 | 9 |
stromal cell | 2.08e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.64e-14 | 3 |
tendon | 3.64e-14 | 3 |
regular connective tissue | 3.64e-14 | 3 |
hypodermis | 1.43e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.24e-13 | 3 |
leiomyoma | 1.24e-13 | 3 |
benign neoplasm | 1.86e-10 | 4 |