FFCP PHASE1:Hg19::chr1:155618323..155618335,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:155618323..155618335,-
|short_description=p2@uc001flf.2
|description=CAGE_peak_2_at_uc001flf.2_5end
|association_with_transcript=0bp_to_uc001flf.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001flf.2_5end | |||
|cluster_id=chr1:155618323..155618335,- | |||
|description=CAGE_peak_2_at_uc001flf.2_5end | |||
|id=chr1:155618323..155618335,- | |||
|ontology_enrichment_celltype=CL:0000055!1.72e-14!180;CL:0000057!2.54e-10!75;CL:0000548!5.02e-08!679;CL:0000004!5.02e-08!679;CL:0000255!5.02e-08!679;CL:0000012!1.06e-07!682;CL:0000220!6.06e-07!246;CL:0000680!7.94e-07!57;CL:0000056!7.94e-07!57;CL:0000355!7.94e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.61e-13;3!CL:1000415;5.59e-09;2!CL:0002539;6.88e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.87e-13,3;CL:0002539,4.06e-09,10;CL:1000415,4.71e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!2.33e-07!29;DOID:120!2.95e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.45e-08;2!DOID:3908;3.14e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.09e-08,2;DOID:3908,4.40e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.32e-08!82;UBERON:0000914!1.17e-07!83;UBERON:0002329!1.17e-07!83;UBERON:0003077!1.17e-07!83;UBERON:0003059!1.17e-07!83;UBERON:0007282!1.17e-07!83;UBERON:0009618!1.17e-07!83;UBERON:0007285!1.17e-07!83;UBERON:0002385!4.30e-07!63;UBERON:0001015!4.30e-07!63;UBERON:0000383!4.30e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.61e-13;3!UBERON:0000920;9.61e-13;3!UBERON:0004237;6.88e-09;10!UBERON:0004695;6.88e-09;10!UBERON:0002111;6.88e-09;10!UBERON:0004178;6.88e-09;10!UBERON:0004903;1.45e-08;2!UBERON:0002173;1.45e-08;2!UBERON:0002186;1.45e-08;2!UBERON:0001135;4.00e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.87e-13,3;UBERON:0004237,4.06e-09,10;UBERON:0004695,4.06e-09,10;UBERON:0002111,4.06e-09,10;UBERON:0004178,4.06e-09,10;UBERON:0004903,2.09e-08,2;UBERON:0002173,2.09e-08,2;UBERON:0002186,2.09e-08,2;UBERON:0001135,2.45e-08,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,2.41077811209591,0,1.46379839637152,0.123121058076788,0.204000691244253,0,1.14494394852423,0.958120975510189,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,12.9760997196954,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,1.5608003841516,0.570471821544449,0,0,0,0,0.408308342509787,0.122834317311768,0.309977343527296,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.250237039743928,0.831192346452549,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,0.358779271377724,0,0.211931901159562,0.600182192168805,0.412210116953756,0.515281080091258,0,8.60759294430458,0.389748020644795,1.00973509697646,0.460249493211497,0.323292113637624,0.355009592516614,0.201504196455281,0.67824236924195,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0.721879481669586,0.473227200159376,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,1.53650399572076,0,0.904760751704678,0.555530670951178,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,6.88726725615324,1.13420077793909,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.1466765716419,0.646358578788889,0,0.845302752556,0,0,0,0,0.532844358032199,0,0,0,0.65147236858747,0,0.791951872933429,1.20575750823834,2.61460037580088,0.599837947092342,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0.473107245101804,0.468565659970853,0,0,0,0.664225598535437,0,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,1.84154367945675,0.561320188866147,0,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.821271560138091,1.03850885836724,0.464841513839837,0,1.20303882181971,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.386682873168488,0,0,0,1.93356440762893,1.0151168573996,0.340906509664404,0.267096106940212,0.826424576804891,0.768760269460425,8.16721359965339,0,0,0,0,1.23213432070436,1.59691809095107,1.73986598415015,0.18532421910392,0,0,0.632758849437452,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0,0,0,3.17020642346017,0.421258456238981,0.48763373908959,1.70599442741899,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0.573645408816206,0.196498082026242,0,0,0.844430541190656,0.658589785919804,0,0,0.673554789078584,0,0,0,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.73254089635947,0,0,1.13654458722565,7.40107902686839,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0,0,0,0,0,0.920418142519393,0,0.622079175323615,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.455173793141999,3.0510438035132,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.455768223388005,0,0,0,12.1220440698129,3.38911095586891,2.13213910407454,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0.485560759068186,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0.391969589657511,1.13176968554523,0,3.0957485844891,0,0,0.0821154570532092,0.193978032976839,0,0,0.685209623233754,0,0.0633107959558787,5.08433595110488,2.80555870880368,0,0.19980960958213,0,0,0,0,0.49701014226173,0,0.951329442515298,0.836822770498666,0.509991088181609,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,1.16160370171347,0.179287339332845,0,0,0,1.017074150619,0,0.864221491201268,0.326587360109409,0,0,2.3854323049959,0,0,0,0.129282956361551,0.13223260174269,2.22412889249628,0.704815022316672,0,0,0,0,0,0,0.638341257770182,4.35214242695579,1.2534494701135,2.14441903734423,0.655745261419609,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0.466311601748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| ||
|short_description=p2@uc001flf.2 | |||
}} | }} |
Latest revision as of 22:19, 27 July 2015
Short description: | p2@uc001flf.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001flf.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001flf.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.87e-13 | 3 |
aortic smooth muscle cell | 4.06e-09 | 10 |
epithelial cell of gall bladder | 4.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.87e-13 | 3 |
blood vessel smooth muscle | 4.06e-09 | 10 |
arterial system smooth muscle | 4.06e-09 | 10 |
artery smooth muscle tissue | 4.06e-09 | 10 |
aorta smooth muscle tissue | 4.06e-09 | 10 |
bronchoalveolar duct junction | 2.09e-08 | 2 |
alveolar duct | 2.09e-08 | 2 |
bronchiole | 2.09e-08 | 2 |
smooth muscle tissue | 2.45e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.09e-08 | 2 |
non-small cell lung carcinoma | 4.40e-07 | 5 |