FFCP PHASE1:Hg19::chr7:142563953..142563963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:142563953..142563963,+ | |||
|coexpression_cluster_id=C4663 | |coexpression_cluster_id=C4663 | ||
|description=CAGE_peak_at_chr7:142563953..142563963,+ | |description=CAGE_peak_at_chr7:142563953..142563963,+ | ||
|id=chr7:142563953..142563963,+ | |id=chr7:142563953..142563963,+ | ||
|ontology_enrichment_celltype=CL:0002561;3.62e-34;2!CL:0002559;2.46e-30;5!CL:0002379;2.66e-18;1!CL:0000540;7.08e-12;6!CL:0000404;7.08e-12;6!CL:0000362;2.29e-08;9!CL:0002077;7.28e-08;34!CL:0000346;9.37e-07;3!CL:1000428;9.37e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002561;3.62e-34;2!CL:0002559;2.46e-30;5!CL:0002379;2.66e-18;1!CL:0000540;7.08e-12;6!CL:0000404;7.08e-12;6!CL:0000362;2.29e-08;9!CL:0002077;7.28e-08;34!CL:0000346;9.37e-07;3!CL:1000428;9.37e-07;3 | ||
|ontology_enrichment_disease=DOID:3620;2.66e-18;1!DOID:3565;2.66e-18;1 | |ontology_enrichment_celltype_v019_2=CL:0002561,4.29e-34,2;CL:0002559,2.86e-30,5;CL:0002379,2.66e-18,1;CL:0000540,6.34e-12,6;CL:0000031,6.34e-12,6;CL:0000404,6.34e-12,6;CL:0000221,1.50e-10,72;CL:0000047,3.55e-09,8;CL:0000362,2.37e-08,9;CL:0002077,3.90e-08,34;CL:0000133,8.73e-07,59;CL:0000346,9.64e-07,3;CL:1000428,9.64e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0005933;3.62e-34;2!UBERON:0005942;3.62e-34;2!UBERON:0005932;3.62e-34;2!UBERON:0002073;2.46e-30;5!UBERON:0001874;5.26e-18;1!UBERON:0000200;3.26e-12;6!UBERON:0001003;1.42e-10;15!UBERON:0007376;1.42e-10;15!UBERON:0002702;8.69e-10;2!UBERON:0002771;9.46e-10;2!UBERON:0001870;6.14e-07;3!UBERON:0005383;7.28e-07;3!UBERON:0005382;7.28e-07;3!UBERON:0000412;9.37e-07;3!UBERON:0001992;9.37e-07;3 | |ontology_enrichment_development_v019=CL:0000031;7.08e-12;6!CL:0000221;1.41e-08;72 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.66e-18;1!DOID:3565;2.66e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.66e-18,1;DOID:3565,2.66e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.85e-19!115;UBERON:0001869!7.87e-19!32;UBERON:0001950!1.18e-18!20;UBERON:0002780!1.27e-18!41;UBERON:0001890!1.27e-18!41;UBERON:0006240!1.27e-18!41;UBERON:0003080!5.09e-18!42;UBERON:0001893!2.16e-17!34;UBERON:0002020!2.18e-17!34;UBERON:0003528!2.18e-17!34;UBERON:0002619!1.27e-16!22;UBERON:0002791!3.06e-16!33;UBERON:0000956!4.19e-16!25;UBERON:0000203!4.19e-16!25;UBERON:0001049!2.85e-15!57;UBERON:0005068!2.85e-15!57;UBERON:0006241!2.85e-15!57;UBERON:0007135!2.85e-15!57;UBERON:0002616!1.69e-14!59;UBERON:0001017!3.12e-14!82;UBERON:0005743!4.43e-14!86;UBERON:0003056!1.73e-13!61;UBERON:0000955!2.18e-13!69;UBERON:0006238!2.18e-13!69;UBERON:0000153!8.81e-13!129;UBERON:0007811!8.81e-13!129;UBERON:0000073!6.81e-12!94;UBERON:0001016!6.81e-12!94;UBERON:0000033!2.33e-11!123;UBERON:0000200!5.10e-11!6;UBERON:0003075!7.31e-11!86;UBERON:0007284!7.31e-11!86;UBERON:0001871!1.88e-10!7;UBERON:0002346!5.03e-10!90;UBERON:0004121!1.58e-08!169;UBERON:0000924!4.35e-08!173;UBERON:0006601!4.35e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;3.62e-34;2!UBERON:0005942;3.62e-34;2!UBERON:0005932;3.62e-34;2!UBERON:0002073;2.46e-30;5!UBERON:0001874;5.26e-18;1!UBERON:0000200;3.26e-12;6!UBERON:0001003;1.42e-10;15!UBERON:0007376;1.42e-10;15!UBERON:0002702;8.69e-10;2!UBERON:0002771;9.46e-10;2!UBERON:0001870;6.14e-07;3!UBERON:0005383;7.28e-07;3!UBERON:0005382;7.28e-07;3!UBERON:0000412;9.37e-07;3!UBERON:0001992;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,4.29e-34,2;UBERON:0005942,4.29e-34,2;UBERON:0005932,4.29e-34,2;UBERON:0002073,2.86e-30,5;UBERON:0005086,2.86e-30,5;UBERON:0001874,4.44e-18,1;UBERON:0000200,3.26e-12,6;UBERON:0001003,1.50e-10,15;UBERON:0007376,1.50e-10,15;UBERON:0007383,1.50e-10,15;UBERON:0002702,8.69e-10,2;UBERON:0002771,9.46e-10,2;UBERON:0001017,5.19e-07,81;UBERON:0004121,5.41e-07,171;UBERON:0000924,5.41e-07,171;UBERON:0006601,5.41e-07,171;UBERON:0001870,6.14e-07,3;UBERON:0005383,6.88e-07,3;UBERON:0005382,6.88e-07,3;UBERON:0000412,9.64e-07,3;UBERON:0001992,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.589211814949674,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,1.54657762555539,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,1.07057393278297,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.640276590135727,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0.999048047910651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.41673541725497,0.625954653532499,0,0,0,0,0,0,0,9.1753669682287,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0.414943514785307,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0.111231401892069,0,2.51384943865603,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.271965960763659,0.436350690340377,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0.535928260312357,0.829169439458779,0.413731983447581,0,0,0.387533459016037,0.186224142887574,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.805095174364105,0 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| ||
|short_description=p@chr7:142563953..142563963,+ | |short_description=p@chr7:142563953..142563963,+ | ||
}} | }} |
Latest revision as of 07:01, 31 July 2015
Short description: | p@chr7:142563953..142563963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:142563953..142563963, + |
Coexpression cluster: | C4663_meningioma_acute_Hair_Mesenchymal_immature_postcentral_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 4.29e-34 | 2 |
hair follicle cell | 2.86e-30 | 5 |
meningothelial cell | 2.66e-18 | 1 |
neuron | 6.34e-12 | 6 |
neuroblast | 6.34e-12 | 6 |
electrically signaling cell | 6.34e-12 | 6 |
ectodermal cell | 1.50e-10 | 72 |
neuronal stem cell | 3.55e-09 | 8 |
epidermal cell | 2.37e-08 | 9 |
ecto-epithelial cell | 3.90e-08 | 34 |
neurectodermal cell | 8.73e-07 | 59 |
hair follicle dermal papilla cell | 9.64e-07 | 3 |
stem cell of epidermis | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 4.29e-34 | 2 |
hair outer root sheath | 4.29e-34 | 2 |
bulb of hair follicle | 4.29e-34 | 2 |
hair follicle | 2.86e-30 | 5 |
hair follicle placode | 2.86e-30 | 5 |
putamen | 4.44e-18 | 1 |
gyrus | 3.26e-12 | 6 |
skin epidermis | 1.50e-10 | 15 |
outer epithelium | 1.50e-10 | 15 |
enveloping layer of ectoderm | 1.50e-10 | 15 |
middle frontal gyrus | 8.69e-10 | 2 |
middle temporal gyrus | 9.46e-10 | 2 |
central nervous system | 5.19e-07 | 81 |
ectoderm-derived structure | 5.41e-07 | 171 |
ectoderm | 5.41e-07 | 171 |
presumptive ectoderm | 5.41e-07 | 171 |
frontal cortex | 6.14e-07 | 3 |
caudate-putamen | 6.88e-07 | 3 |
dorsal striatum | 6.88e-07 | 3 |
dermal papilla | 9.64e-07 | 3 |
papillary layer of dermis | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.66e-18 | 1 |
meningioma | 2.66e-18 | 1 |