FFCP PHASE1:Hg19::chr15:72264531..72264550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:72264531..72264550,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_at_chr15:72264531..72264550,+ | |description=CAGE_peak_at_chr15:72264531..72264550,+ | ||
|id=chr15:72264531..72264550,+ | |id=chr15:72264531..72264550,+ | ||
|ontology_enrichment_celltype=CL:0000349;2.66e-48;19!CL:0002541;6.86e-36;3!CL:0002536;5.35e-24;2!CL:0002577;1.61e-16;3!CL:0002537;3.42e-10;5!CL:0000039;9.88e-08;7!CL:0000586;9.88e-08;7 | |ontology_enrichment_celltype=CL:0002541!2.12e-15!3;CL:0000349!4.13e-15!3;CL:0002577!4.13e-15!3;CL:0000039!6.03e-11!7;CL:0000586!6.03e-11!7;CL:0002536!1.09e-10!2;CL:0002537!4.44e-09!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;2.66e-48;19!CL:0002541;6.86e-36;3!CL:0002536;5.35e-24;2!CL:0002577;1.61e-16;3!CL:0002537;3.42e-10;5!CL:0000039;9.88e-08;7!CL:0000586;9.88e-08;7 | ||
|ontology_enrichment_disease=DOID:1799;6.82e-13;1!DOID:10165;6.82e-13;1!DOID:1798;6.82e-13;1 | |ontology_enrichment_celltype_v019_2=CL:0000349,2.25e-48,19;CL:0002541,8.72e-36,3;CL:0002536,4.23e-24,2;CL:0002577,1.37e-16,3;CL:0002537,3.27e-10,5;CL:0000039,9.88e-08,7;CL:0000586,9.88e-08,7 | ||
|ontology_enrichment_uberon=UBERON:0005631;4.32e-56;10!UBERON:0000158;4.32e-56;10!UBERON:0000478;3.36e-47;24!UBERON:0003124;6.86e-36;3!UBERON:0000920;6.86e-36;3!UBERON:0001987;3.77e-27;4!UBERON:0000305;1.45e-26;7 | |ontology_enrichment_development_v019=UBERON:0003124;1.61e-13;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;6.82e-13;1!DOID:10165;6.82e-13;1!DOID:1798;6.82e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.73e-13,1;DOID:10165,9.73e-13,1;DOID:1798,9.73e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.18e-47!14;UBERON:0000158!3.18e-47!14;UBERON:0003124!1.99e-33!7;UBERON:0000478!1.87e-26!24;UBERON:0001987!8.37e-20!4;UBERON:0004340!8.37e-20!4;UBERON:0000305!6.65e-17!7;UBERON:0000476!2.12e-15!3;UBERON:0000920!2.12e-15!3;UBERON:0004871!9.28e-15!8;UBERON:0004923!3.43e-13!57;UBERON:0000995!3.45e-10!21;UBERON:0000341!6.70e-10!2;UBERON:0005795!1.11e-09!22;UBERON:0003975!1.11e-09!22;UBERON:0004175!2.11e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.32e-56;10!UBERON:0000158;4.32e-56;10!UBERON:0000478;3.36e-47;24!UBERON:0003124;6.86e-36;3!UBERON:0000920;6.86e-36;3!UBERON:0001987;3.77e-27;4!UBERON:0000305;1.45e-26;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.01e-81,14;UBERON:0000158,1.01e-81,14;UBERON:0003124,5.27e-60,7;UBERON:0000478,2.91e-47,24;UBERON:0000920,8.72e-36,3;UBERON:0001987,3.16e-27,4;UBERON:0004340,3.16e-27,4;UBERON:0000305,1.19e-26,7;UBERON:0004871,2.27e-23,8;UBERON:0004923,1.86e-16,66;UBERON:0000995,3.45e-09,21;UBERON:0005795,8.84e-09,22;UBERON:0003975,8.84e-09,22;UBERON:0004175,9.50e-08,25 | |||
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|short_description=p@chr15:72264531..72264550,+ | |short_description=p@chr15:72264531..72264550,+ | ||
}} | }} |
Latest revision as of 03:56, 25 July 2015
Short description: | p@chr15:72264531..72264550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:72264531..72264550, + |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.25e-48 | 19 |
chorionic membrane mesenchymal stem cell | 8.72e-36 | 3 |
amniotic epithelial cell | 4.23e-24 | 2 |
placental epithelial cell | 1.37e-16 | 3 |
amnion mesenchymal stem cell | 3.27e-10 | 5 |
germ line cell | 9.88e-08 | 7 |
germ cell | 9.88e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.01e-81 | 14 |
membranous layer | 1.01e-81 | 14 |
chorion | 5.27e-60 | 7 |
extraembryonic structure | 2.91e-47 | 24 |
egg chorion | 8.72e-36 | 3 |
placenta | 3.16e-27 | 4 |
allantois | 3.16e-27 | 4 |
amnion | 1.19e-26 | 7 |
somatic layer of lateral plate mesoderm | 2.27e-23 | 8 |
organ component layer | 1.86e-16 | 66 |
uterus | 3.45e-09 | 21 |
embryonic uterus | 8.84e-09 | 22 |
internal female genitalia | 8.84e-09 | 22 |
internal genitalia | 9.50e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.73e-13 | 1 |
endocrine pancreas cancer | 9.73e-13 | 1 |
pancreatic endocrine carcinoma | 9.73e-13 | 1 |