FFCP PHASE1:Hg19::chr14:105219501..105219550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10572 | |EntrezGene=10572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17712 | |HGNC=17712 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3U1 | |UniProt=G3V3U1 | ||
|association_with_transcript=0bp_to_ENST00000553819,ENST00000554013,ENST00000556431_5end | |association_with_transcript=0bp_to_ENST00000553819,ENST00000554013,ENST00000556431_5end | ||
|cluster_id=chr14:105219501..105219550,+ | |||
|description=CAGE_peak_1_at_SIVA1_5end | |description=CAGE_peak_1_at_SIVA1_5end | ||
|id=chr14:105219501..105219550,+ | |id=chr14:105219501..105219550,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000012!6.23e-18!682;CL:0000548!9.01e-17!679;CL:0000004!9.01e-17!679;CL:0000255!9.01e-17!679;CL:0002371!3.07e-12!591;CL:0000003!5.41e-12!722;CL:0000144!1.03e-11!625;CL:0000063!2.83e-08!578;CL:0000220!7.85e-08!246;CL:0002321!1.40e-07!248;CL:0002078!4.54e-07!44;CL:0000222!7.08e-07!119 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.06e-07,250;CL:0002078,4.22e-07,45;CL:0000066,6.40e-07,253;CL:0000115,9.55e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000487;3.06e-07;22!UBERON:0006914;3.85e-07;25 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!4.88e-11!138;UBERON:0003104!4.12e-09!238;UBERON:0009142!4.12e-09!238;UBERON:0003914!5.85e-09!118;UBERON:0005256!1.98e-08!143;UBERON:0001981!7.35e-08!60;UBERON:0007500!7.35e-08!60;UBERON:0004537!7.35e-08!60;UBERON:0006965!7.35e-08!60;UBERON:0000055!2.04e-07!69;UBERON:0002049!2.33e-07!79;UBERON:0007798!2.33e-07!79;UBERON:0000487!2.73e-07!22;UBERON:0006914!3.59e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.06e-07;22!UBERON:0006914;3.85e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,9.60e-12,148;UBERON:0003914,2.47e-09,117;UBERON:0005256,1.40e-08,122;UBERON:0007500,3.14e-08,59;UBERON:0001981,3.14e-08,59;UBERON:0004537,3.14e-08,59;UBERON:0006965,3.14e-08,59;UBERON:0000055,9.67e-08,68;UBERON:0002049,1.18e-07,78;UBERON:0007798,1.18e-07,78;UBERON:0000487,2.73e-07,22;UBERON:0006914,3.59e-07,25;UBERON:0007503,4.45e-07,78;UBERON:0003104,5.72e-07,160;UBERON:0009142,5.72e-07,160 | |||
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| ||
|short_description=p1@SIVA1 | |short_description=p1@SIVA1 | ||
}} | }} |
Latest revision as of 17:30, 18 September 2015
Short description: | p1@SIVA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIVA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000553819, ENST00000554013, ENST00000556431_5end |
EntrezGene: | SIVA1 |
HGNC: | 17712 |
UniProt: | G3V3U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.06e-07 | 250 |
meso-epithelial cell | 4.22e-07 | 45 |
epithelial cell | 6.40e-07 | 253 |
endothelial cell | 9.55e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 9.60e-12 | 148 |
epithelial tube | 2.47e-09 | 117 |
trunk mesenchyme | 1.40e-08 | 122 |
epithelial tube open at both ends | 3.14e-08 | 59 |
blood vessel | 3.14e-08 | 59 |
blood vasculature | 3.14e-08 | 59 |
vascular cord | 3.14e-08 | 59 |
vessel | 9.67e-08 | 68 |
vasculature | 1.18e-07 | 78 |
vascular system | 1.18e-07 | 78 |
simple squamous epithelium | 2.73e-07 | 22 |
squamous epithelium | 3.59e-07 | 25 |
epithelial vesicle | 4.45e-07 | 78 |
mesenchyme | 5.72e-07 | 160 |
entire embryonic mesenchyme | 5.72e-07 | 160 |