FFCP PHASE1:Hg19::chr19:20334742..20334750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:20334742..20334750,- | |||
|coexpression_cluster_id=C196 | |coexpression_cluster_id=C196 | ||
|description=CAGE_peak_at_chr19:20334742..20334750,- | |description=CAGE_peak_at_chr19:20334742..20334750,- | ||
|id=chr19:20334742..20334750,- | |id=chr19:20334742..20334750,- | ||
|ontology_enrichment_celltype=CL:0002319!3.25e-07!25;CL:0002322!7.49e-07!5 | |ontology_enrichment_celltype=CL:0002319!3.25e-07!25;CL:0002322!7.49e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.59e-27;5!CL:0000540;2.97e-23;6!CL:0000404;2.97e-23;6!CL:0002321;6.73e-14;15!CL:0002319;7.59e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.91e-27,5;CL:0000540,3.06e-23,6;CL:0000031,3.06e-23,6;CL:0000404,3.06e-23,6;CL:0000047,1.70e-17,8;CL:0002319,8.23e-11,25;CL:0000133,6.31e-10,59;CL:0000221,5.98e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.97e-23;6!CL:0000133;5.66e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;2.24e-09;22!DOID:2994;2.24e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.05e-09,22;DOID:2994,2.05e-09,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.821246550437305,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0.154934401160603,0.710846162437108,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0.800791974072025,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0,0,0.283604451492204,0,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0.625592599359821,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,2.31750041646231,1.72288698817931,4.53156377191122,0.621966330092223,4.28945446488568,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,2.20731549707325,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.80672114403045,0,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0.76228387266739,0,0,0,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.606255142892519,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.616194468458578,0.767518373630648,0.137836572484531,0.214840489736547,0,0.511359764496605,0.178064071293475,0,0.384380134730212,0.382838137483752,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0,0.384888450902048,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0.721346064882224,0.782560276832555,0,0.997896857164083,0,1.2700414963433,0,0.561594356226918,0,0,0,0,0,0,0,0,0.614481528616916,0.671028323677248,0.500547425135725,0,0,0,0.540911356951966,0,0,0,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0.254253650292766,0,1.03423011972439,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0.113942055847001,1.1528195219403,0.359030577639089,0.325942115766024,0,0,0,1.02193298195737,0.470940769185074,0.332423363800313,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.794858446811959,0.126621591911757,0.977756913674015,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.410716136675979,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0.592713324460491,0,0.136203406111576,7.23389168092586,5.08895915409765,4.15440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.258565912723101,0,0,0.704815022316672,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0.499921631848426,0,0.285465333544967,0,1.40500471742064,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0.226705925512272,0,0.734210113519403,0,0,0,0.353378291891762,0,0.506827321959218,0.256241518587947,1.72715170865599,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85656384926424,1.52759276958623,0.212574920101683,0.371807292777007,0,0,0.788617450012533,0,0,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,1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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.821246550437305,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0.154934401160603,0.710846162437108,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0.800791974072025,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0,0,0.283604451492204,0,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0.625592599359821,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,2.31750041646231,1.72288698817931,4.53156377191122,0.621966330092223,4.28945446488568,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,2.20731549707325,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.80672114403045,0,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0.76228387266739,0,0,0,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.606255142892519,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.616194468458578,0.767518373630648,0.137836572484531,0.214840489736547,0,0.511359764496605,0.178064071293475,0,0.384380134730212,0.382838137483752,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0,0.384888450902048,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0.721346064882224,0.782560276832555,0,0.997896857164083,0,1.2700414963433,0,0.561594356226918,0,0,0,0,0,0,0,0,0.614481528616916,0.671028323677248,0.500547425135725,0,0,0,0.540911356951966,0,0,0,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0.254253650292766,0,1.03423011972439,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0.113942055847001,1.1528195219403,0.359030577639089,0.325942115766024,0,0,0,1.02193298195737,0.470940769185074,0.332423363800313,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.794858446811959,0.126621591911757,0.977756913674015,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.410716136675979,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0.592713324460491,0,0.136203406111576,7.23389168092586,5.08895915409765,4.15440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.258565912723101,0,0,0.704815022316672,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0.499921631848426,0,0.285465333544967,0,1.40500471742064,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0.226705925512272,0,0.734210113519403,0,0,0,0.353378291891762,0,0.506827321959218,0.256241518587947,1.72715170865599,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85656384926424,1.52759276958623,0.212574920101683,0.371807292777007,0,0,0.788617450012533,0,0,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,1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| ||
|short_description=p@chr19:20334742..20334750,- | |short_description=p@chr19:20334742..20334750,- | ||
}} | }} |
Latest revision as of 05:35, 26 July 2015
Short description: | p@chr19:20334742..20334750, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:20334742..20334750, - |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.91e-27 | 5 |
neuron | 3.06e-23 | 6 |
neuroblast | 3.06e-23 | 6 |
electrically signaling cell | 3.06e-23 | 6 |
neuronal stem cell | 1.70e-17 | 8 |
neural cell | 8.23e-11 | 25 |
neurectodermal cell | 6.31e-10 | 59 |
ectodermal cell | 5.98e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.05e-09 | 22 |
germ cell cancer | 2.05e-09 | 22 |