FFCP PHASE1:Hg19::chr1:1535115..1535139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643988 | |EntrezGene=643988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=336bp_to_AB188495_5end | |association_with_transcript=336bp_to_AB188495_5end | ||
|cluster_id=chr1:1535115..1535139,- | |||
|description=CAGE_peak_4_at_LOC643988_5end | |description=CAGE_peak_4_at_LOC643988_5end | ||
|id=chr1:1535115..1535139,- | |id=chr1:1535115..1535139,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;8.43e-33;10!CL:0000147;3.29e-23;14!CL:0002567;7.11e-22;3!CL:0000710;5.31e-16;20!CL:0000075;1.24e-11;27!CL:0002077;3.92e-08;34!CL:0002566;5.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.11e-32,10;CL:0000541,1.11e-32,10;CL:0000147,3.99e-23,14;CL:0002567,7.95e-22,3;CL:0000710,6.06e-16,20;CL:0000075,1.36e-11,27;CL:0002077,4.99e-09,34;CL:0000333,5.55e-09,41;CL:0002566,3.58e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;2.43e-08;1!DOID:3151;5.97e-08;1!DOID:3149;5.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,2.35e-08,1;DOID:3151,7.59e-08,1;DOID:3149,7.59e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.23e-08!57;UBERON:0005068!2.23e-08!57;UBERON:0006241!2.23e-08!57;UBERON:0007135!2.23e-08!57;UBERON:0001869!1.26e-07!32;UBERON:0002020!1.46e-07!34;UBERON:0003528!1.46e-07!34;UBERON:0001893!2.08e-07!34;UBERON:0002346!4.34e-07!90;UBERON:0002619!4.92e-07!22;UBERON:0001950!4.94e-07!20;UBERON:0002791!8.14e-07!33 | |ontology_enrichment_uberon=UBERON:0001049!2.23e-08!57;UBERON:0005068!2.23e-08!57;UBERON:0006241!2.23e-08!57;UBERON:0007135!2.23e-08!57;UBERON:0001869!1.26e-07!32;UBERON:0002020!1.46e-07!34;UBERON:0003528!1.46e-07!34;UBERON:0001893!2.08e-07!34;UBERON:0002346!4.34e-07!90;UBERON:0002619!4.92e-07!22;UBERON:0001950!4.94e-07!20;UBERON:0002791!8.14e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.16e-11;20!UBERON:0001870;5.00e-10;3!UBERON:0002619;6.11e-10;22!UBERON:0000956;9.86e-09;25!UBERON:0000203;9.86e-09;25!UBERON:0002581;5.97e-08;1!UBERON:0002902;5.97e-08;1!UBERON:0002022;5.97e-08;1!UBERON:0009899;5.97e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.16e-11,20;UBERON:0002619,5.20e-10,22;UBERON:0001870,6.00e-10,3;UBERON:0000956,8.57e-09,25;UBERON:0000203,8.57e-09,25;UBERON:0002022,3.83e-08,1;UBERON:0002581,4.11e-08,1;UBERON:0002902,5.40e-08,1;UBERON:0009899,5.40e-08,1;UBERON:0002791,8.19e-07,32;UBERON:0001869,8.19e-07,32 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.552700035571697,0.869409257205157,0,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.654895377488563,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,1.38134921352481,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.548751427043128,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,2.37061319387782,0.858486162094873,0.246217006087397,0,0,0,0.335964256397719,0,0.179117045405697,0,0.766765358330422,0,0.352193736052904,0,0,0.12624243342638,1.8414389344729,4.20187268114105,2.34434894420094,5.13217338068116,1.02827492703324,3.00343057843917,1.42913216315289,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.54941678891006,0.495056999523528,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0,0.606547444719948,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0.399158742865633,0,0.211673582723883,0.649243880549111,0,0,0.156679895773023,0,0,0,0.605399121573143,0.425846237690326,0,0.614481528616916,0.894704431569664,0.834245708559542,0.781552381608161,0.556812347790485,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0,0,0,0,0,0,0,0.179021174675609,1.53471711068062,0,0,0,1.93866549219044,0.74214478529481,0,0.7812832832557,0.524759999977174,0,0.796554137998498,0,3.30942754475111,0.344743373241465,0,0,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0.113942055847001,0.23056390438806,0.179515288819544,0,0,0.183195186803725,0.533034776018635,0,0,2.49317522850235,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.586993856796269,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,1.26621591911757,0.782205530939212,0,0,1.19885765749278,0.288180834308212,0.114536596165916,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0,1.76173714308272,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0.082092520749339,0,0.339936274560377,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,2.65820453990096,0.488105059607853,0.751145584238999,0,0.110929051536852,0.745156835296601,0,0.124980407962107,0,0.285465333544967,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,1.04397716786085,0,0,1.22368352253234,0.358177682162975,0.617602894321944,1.97355644620836,0.530067437837643,0.192914038270915,0.168942440653073,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.642292250964595,0,0.478901577171454,0.615349092722265,0,1.52145955421279,0.161475645631851,0,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0.261906694481422,0,0,0.742913430802341,0.781078098613847,0.2066867965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| ||
|short_description=p4@LOC643988 | |short_description=p4@LOC643988 | ||
}} | }} |
Latest revision as of 05:40, 17 September 2015
Short description: | p4@LOC643988 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC643988_5end |
Coexpression cluster: | NA |
Association with transcript: | 336bp_to_AB188495_5end |
EntrezGene: | LOC643988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.11e-32 | 10 |
melanoblast | 1.11e-32 | 10 |
pigment cell | 3.99e-23 | 14 |
light melanocyte | 7.95e-22 | 3 |
neurecto-epithelial cell | 6.06e-16 | 20 |
columnar/cuboidal epithelial cell | 1.36e-11 | 27 |
ecto-epithelial cell | 4.99e-09 | 34 |
migratory neural crest cell | 5.55e-09 | 41 |
dark melanocyte | 3.58e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.16e-11 | 20 |
regional part of cerebral cortex | 5.20e-10 | 22 |
frontal cortex | 6.00e-10 | 3 |
cerebral cortex | 8.57e-09 | 25 |
pallium | 8.57e-09 | 25 |
insula | 3.83e-08 | 1 |
postcentral gyrus | 4.11e-08 | 1 |
occipital pole | 5.40e-08 | 1 |
pole of cerebral hemisphere | 5.40e-08 | 1 |
regional part of telencephalon | 8.19e-07 | 32 |
cerebral hemisphere | 8.19e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 2.35e-08 | 1 |
skin squamous cell carcinoma | 7.59e-08 | 1 |
keratoacanthoma | 7.59e-08 | 1 |