FFCP PHASE1:Hg19::chr7:45678955..45678963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:45678955..45678963,+ | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_at_chr7:45678955..45678963,+ | |description=CAGE_peak_at_chr7:45678955..45678963,+ | ||
|id=chr7:45678955..45678963,+ | |id=chr7:45678955..45678963,+ | ||
|ontology_enrichment_celltype=CL:0002535!5.04e-34!2;CL:0000214!4.09e-23!3;CL:0000153!1.21e-08!9;CL:0000447!1.21e-08!9 | |ontology_enrichment_celltype=CL:0002535!5.04e-34!2;CL:0000214!4.09e-23!3;CL:0000153!1.21e-08!9;CL:0000447!1.21e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.52e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.52e-50,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4362!1.60e-14!5 | |ontology_enrichment_disease=DOID:4362!1.60e-14!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;5.15e-21;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.15e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0006955!5.04e-34!2;UBERON:0004801!5.04e-34!2;UBERON:0006915!4.09e-23!3;UBERON:0002018!4.09e-23!3;UBERON:0002217!4.09e-23!3;UBERON:0007616!4.09e-23!3;UBERON:0004905!1.83e-14!5;UBERON:0000982!1.83e-14!5;UBERON:0004770!1.83e-14!5;UBERON:0000002!2.45e-12!6;UBERON:0001560!2.45e-12!6;UBERON:0001264!5.73e-08!10;UBERON:0003922!5.73e-08!10;UBERON:0003923!5.73e-08!10;UBERON:0003924!5.73e-08!10;UBERON:0003921!5.73e-08!10;UBERON:0001045!2.32e-07!11;UBERON:0004457!8.38e-07!12;UBERON:0000042!8.38e-07!12 | |ontology_enrichment_uberon=UBERON:0006955!5.04e-34!2;UBERON:0004801!5.04e-34!2;UBERON:0006915!4.09e-23!3;UBERON:0002018!4.09e-23!3;UBERON:0002217!4.09e-23!3;UBERON:0007616!4.09e-23!3;UBERON:0004905!1.83e-14!5;UBERON:0000982!1.83e-14!5;UBERON:0004770!1.83e-14!5;UBERON:0000002!2.45e-12!6;UBERON:0001560!2.45e-12!6;UBERON:0001264!5.73e-08!10;UBERON:0003922!5.73e-08!10;UBERON:0003923!5.73e-08!10;UBERON:0003924!5.73e-08!10;UBERON:0003921!5.73e-08!10;UBERON:0001045!2.32e-07!11;UBERON:0004457!8.38e-07!12;UBERON:0000042!8.38e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.52e-50;2!UBERON:0004801;4.52e-50;2!UBERON:0000002;9.07e-18;6!UBERON:0001560;9.07e-18;6!UBERON:0001264;2.73e-11;10!UBERON:0000995;3.58e-07;17!UBERON:0002075;7.18e-07;18!UBERON:0003975;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.52e-50,2;UBERON:0004801,4.52e-50,2;UBERON:0000002,9.07e-18,6;UBERON:0001560,9.07e-18,6;UBERON:0001264,2.73e-11,10;UBERON:0002075,7.18e-07,18 | |||
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|short_description=p@chr7:45678955..45678963,+ | |short_description=p@chr7:45678955..45678963,+ | ||
}} | }} |
Latest revision as of 10:23, 31 July 2015
Short description: | p@chr7:45678955..45678963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45678955..45678963, + |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.52e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.52e-50 | 2 |
cervix epithelium | 4.52e-50 | 2 |
uterine cervix | 9.07e-18 | 6 |
neck of organ | 9.07e-18 | 6 |
pancreas | 2.73e-11 | 10 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.15e-21 | 5 |