FFCP PHASE1:Hg19::chr7:48080858..48080881,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:48080858..48080881,+ | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr7:48080858..48080881,+ | |description=CAGE_peak_at_chr7:48080858..48080881,+ | ||
|id=chr7:48080858..48080881,+ | |id=chr7:48080858..48080881,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.32e-29!7;CL:0000586!7.32e-29!7;CL:0000062!6.53e-11!11;CL:0000375!6.53e-11!11;CL:0000335!6.53e-11!11;CL:0002600!1.45e-07!2;CL:1000415!2.25e-07!2;CL:0000243!3.61e-07!15;CL:0000125!3.61e-07!15;CL:0000030!3.61e-07!15;CL:0000339!3.61e-07!15 | |ontology_enrichment_celltype=CL:0000039!7.32e-29!7;CL:0000586!7.32e-29!7;CL:0000062!6.53e-11!11;CL:0000375!6.53e-11!11;CL:0000335!6.53e-11!11;CL:0002600!1.45e-07!2;CL:1000415!2.25e-07!2;CL:0000243!3.61e-07!15;CL:0000125!3.61e-07!15;CL:0000030!3.61e-07!15;CL:0000339!3.61e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.02e-23;7!CL:0000586;2.02e-23;7!CL:0000062;1.24e-18;9!CL:0000128;5.08e-07;7!CL:0000126;5.08e-07;7!CL:0000127;5.08e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.02e-23,7;CL:0000586,2.02e-23,7;CL:0000062,1.88e-15,11;CL:0000375,1.88e-15,11;CL:0000335,1.88e-15,11;CL:0000128,5.08e-07,7;CL:0000126,5.08e-07,7;CL:0000127,5.08e-07,7;CL:0002453,5.08e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.54e-17;10!UBERON:0005564;9.54e-17;10!CL:0000335;1.88e-15;11 | |||
|ontology_enrichment_disease=DOID:3093!6.09e-10!11;DOID:3095!2.19e-09!22;DOID:2994!2.19e-09!22;DOID:154!1.54e-07!2;DOID:4236!1.54e-07!2 | |ontology_enrichment_disease=DOID:3093!6.09e-10!11;DOID:3095!2.19e-09!22;DOID:2994!2.19e-09!22;DOID:154!1.54e-07!2;DOID:4236!1.54e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.51e-08;22!DOID:2994;3.51e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.51e-08,22;DOID:2994,3.51e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.63e-25!8;UBERON:0003135!1.67e-18!11;UBERON:0000991!7.46e-15!21;UBERON:0009196!7.46e-15!21;UBERON:0009117!7.46e-15!21;UBERON:0005564!7.46e-15!21;UBERON:0004176!3.53e-14!22;UBERON:0002323!2.04e-09!46;UBERON:0003101!2.19e-09!22;UBERON:0000079!2.19e-09!22;UBERON:0003133!4.78e-09!48;UBERON:0004458!8.11e-09!49;UBERON:0005156!2.73e-07!59;UBERON:0000990!2.73e-07!59;UBERON:0003886!8.95e-07!63 | |ontology_enrichment_uberon=UBERON:0000473!2.63e-25!8;UBERON:0003135!1.67e-18!11;UBERON:0000991!7.46e-15!21;UBERON:0009196!7.46e-15!21;UBERON:0009117!7.46e-15!21;UBERON:0005564!7.46e-15!21;UBERON:0004176!3.53e-14!22;UBERON:0002323!2.04e-09!46;UBERON:0003101!2.19e-09!22;UBERON:0000079!2.19e-09!22;UBERON:0003133!4.78e-09!48;UBERON:0004458!8.11e-09!49;UBERON:0005156!2.73e-07!59;UBERON:0000990!2.73e-07!59;UBERON:0003886!8.95e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.21e-20;8!UBERON:0003135;2.51e-15;11!UBERON:0001474;7.42e-10;18!UBERON:0000991;1.59e-08;21!UBERON:0003101;3.51e-08;22!UBERON:0000079;3.51e-08;22!UBERON:0004765;4.02e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-20,8;UBERON:0003135,2.51e-15,11;UBERON:0000991,1.59e-08,21;UBERON:0009196,1.59e-08,21;UBERON:0009117,1.59e-08,21;UBERON:0005564,1.59e-08,21;UBERON:0004176,3.51e-08,22;UBERON:0003101,3.51e-08,22;UBERON:0000079,3.51e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6220579189278,11.1387824892794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.8847861758404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.77103935781043,0.801652215796681,3.12442658418473,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6220579189278,11.1387824892794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.8847861758404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.77103935781043,0.801652215796681,3.12442658418473,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:48080858..48080881,+ | |short_description=p@chr7:48080858..48080881,+ | ||
}} | }} |
Latest revision as of 10:34, 31 July 2015
Short description: | p@chr7:48080858..48080881, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:48080858..48080881, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.02e-23 | 7 |
germ cell | 2.02e-23 | 7 |
osteoblast | 1.88e-15 | 11 |
osteoprogenitor cell | 1.88e-15 | 11 |
mesenchyme condensation cell | 1.88e-15 | 11 |
oligodendrocyte | 5.08e-07 | 7 |
macroglial cell | 5.08e-07 | 7 |
astrocyte | 5.08e-07 | 7 |
oligodendrocyte precursor cell | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.21e-20 | 8 |
male reproductive organ | 2.51e-15 | 11 |
gonad | 1.59e-08 | 21 |
indifferent external genitalia | 1.59e-08 | 21 |
indifferent gonad | 1.59e-08 | 21 |
gonad primordium | 1.59e-08 | 21 |
external genitalia | 3.51e-08 | 22 |
male organism | 3.51e-08 | 22 |
male reproductive system | 3.51e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.51e-08 | 22 |
germ cell cancer | 3.51e-08 | 22 |