FFCP PHASE1:Hg19::chr4:159592996..159593059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201725 | |EntrezGene=201725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27320 | |HGNC=27320 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFF4 | |UniProt=D6RFF4 | ||
|association_with_transcript=0bp_to_ENST00000508457_5end | |association_with_transcript=0bp_to_ENST00000508457_5end | ||
|cluster_id=chr4:159592996..159593059,- | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_C4orf46_5end | |description=CAGE_peak_1_at_C4orf46_5end | ||
|id=chr4:159592996..159593059,- | |id=chr4:159592996..159593059,- | ||
|ontology_enrichment_celltype=CL:0000012!9.62e-23!682;CL:0000548!1.38e-21!679;CL:0000004!1.38e-21!679;CL:0000255!1.38e-21!679;CL:0000003!3.73e-13!722;CL:0000144!4.03e-13!625;CL:0000063!3.02e-09!578;CL:0002371!5.02e-09!591;CL:0000055!5.23e-09!180;CL:0000133!1.54e-07!59;CL:0000333!1.71e-07!41;CL:0000066!2.21e-07!254 | |ontology_enrichment_celltype=CL:0000012!9.62e-23!682;CL:0000548!1.38e-21!679;CL:0000004!1.38e-21!679;CL:0000255!1.38e-21!679;CL:0000003!3.73e-13!722;CL:0000144!4.03e-13!625;CL:0000063!3.02e-09!578;CL:0002371!5.02e-09!591;CL:0000055!5.23e-09!180;CL:0000133!1.54e-07!59;CL:0000333!1.71e-07!41;CL:0000066!2.21e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.54e-07,59;CL:0000066,1.68e-07,253;CL:0000333,1.71e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.23e-27!235;DOID:14566!7.35e-26!239;DOID:0050686!6.52e-19!137;DOID:2531!1.22e-18!51;DOID:0060083!1.22e-18!51;DOID:1240!4.49e-14!39;DOID:0050687!2.89e-10!143;DOID:8692!8.52e-10!31;DOID:305!5.18e-07!106 | |ontology_enrichment_disease=DOID:162!5.23e-27!235;DOID:14566!7.35e-26!239;DOID:0050686!6.52e-19!137;DOID:2531!1.22e-18!51;DOID:0060083!1.22e-18!51;DOID:1240!4.49e-14!39;DOID:0050687!2.89e-10!143;DOID:8692!8.52e-10!31;DOID:305!5.18e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.77e-11;39!DOID:2531;3.99e-11;51!DOID:0060083;3.99e-11;51!DOID:8692;1.99e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.45e-27,235;DOID:14566,7.64e-26,239;DOID:0050686,6.51e-19,137;DOID:2531,1.22e-18,51;DOID:0060083,1.22e-18,51;DOID:1240,4.49e-14,39;DOID:0050687,2.97e-10,143;DOID:8692,8.51e-10,31;DOID:305,5.17e-07,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@C4orf46 | |short_description=p1@C4orf46 | ||
}} | }} |
Latest revision as of 11:00, 16 September 2015
Short description: | p1@C4orf46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C4orf46_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000508457_5end |
EntrezGene: | C4orf46 |
HGNC: | 27320 |
UniProt: | D6RFF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.54e-07 | 59 |
epithelial cell | 1.68e-07 | 253 |
migratory neural crest cell | 1.71e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.45e-27 | 235 |
disease of cellular proliferation | 7.64e-26 | 239 |
organ system cancer | 6.51e-19 | 137 |
hematologic cancer | 1.22e-18 | 51 |
immune system cancer | 1.22e-18 | 51 |
leukemia | 4.49e-14 | 39 |
cell type cancer | 2.97e-10 | 143 |
myeloid leukemia | 8.51e-10 | 31 |
carcinoma | 5.17e-07 | 106 |