FFCP PHASE1:Hg19::chr14:37051768..37051779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26257 | |EntrezGene=26257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16364 | |HGNC=16364 | ||
|TSSclassifier=strong | |||
|UniProt=O15522 | |UniProt=O15522 | ||
|association_with_transcript=6bp_to_NM_014360,uc001wtx.2_5end | |association_with_transcript=6bp_to_NM_014360,uc001wtx.2_5end | ||
|cluster_id=chr14:37051768..37051779,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_4_at_NKX2-8_5end | |description=CAGE_peak_4_at_NKX2-8_5end | ||
|id=chr14:37051768..37051779,- | |id=chr14:37051768..37051779,- | ||
|ontology_enrichment_celltype=CL:0000066!7.95e-07!254;CL:0002076!8.58e-07!43 | |ontology_enrichment_celltype=CL:0000066!7.95e-07!254;CL:0002076!8.58e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.83e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,6.15e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.71e-14;10!UBERON:0005564;3.71e-14;10 | |||
|ontology_enrichment_disease=DOID:1749!2.15e-10!14;DOID:305!4.86e-10!106;DOID:0050687!1.43e-07!143;DOID:162!3.01e-07!235;DOID:14566!6.09e-07!239 | |ontology_enrichment_disease=DOID:1749!2.15e-10!14;DOID:305!4.86e-10!106;DOID:0050687!1.43e-07!143;DOID:162!3.01e-07!235;DOID:14566!6.09e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!2.05e-10!5;UBERON:0004117!2.05e-10!5;UBERON:0007689!2.05e-10!5;UBERON:0007123!2.05e-10!5;UBERON:0003091!2.05e-10!5;UBERON:0002298!1.59e-09!8;UBERON:0000065!1.85e-08!53;UBERON:0003343!1.53e-07!4;UBERON:0004785!1.53e-07!4;UBERON:0001004!1.98e-07!72;UBERON:0003076!3.53e-07!15;UBERON:0003057!3.53e-07!15;UBERON:0008814!5.93e-07!15;UBERON:0004119!7.78e-07!169;UBERON:0000925!7.78e-07!169;UBERON:0006595!7.78e-07!169 | |ontology_enrichment_uberon=UBERON:0002046!2.05e-10!5;UBERON:0004117!2.05e-10!5;UBERON:0007689!2.05e-10!5;UBERON:0007123!2.05e-10!5;UBERON:0003091!2.05e-10!5;UBERON:0002298!1.59e-09!8;UBERON:0000065!1.85e-08!53;UBERON:0003343!1.53e-07!4;UBERON:0004785!1.53e-07!4;UBERON:0001004!1.98e-07!72;UBERON:0003076!3.53e-07!15;UBERON:0003057!3.53e-07!15;UBERON:0008814!5.93e-07!15;UBERON:0004119!7.78e-07!169;UBERON:0000925!7.78e-07!169;UBERON:0006595!7.78e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.97e-34;1!UBERON:0006518;5.97e-34;1!UBERON:0008949;5.97e-34;1!UBERON:0000101;5.97e-34;1!UBERON:0002167;5.97e-34;1!UBERON:0000473;2.01e-17;8!UBERON:0003135;5.76e-13;11!UBERON:0000991;2.95e-07;21!UBERON:0003101;5.74e-07;22!UBERON:0000079;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.61e-34,1;UBERON:0006518,3.61e-34,1;UBERON:0008949,3.61e-34,1;UBERON:0000101,3.61e-34,1;UBERON:0002167,3.61e-34,1;UBERON:0000473,2.01e-17,8;UBERON:0003135,5.76e-13,11;UBERON:0000991,2.95e-07,21;UBERON:0009196,2.95e-07,21;UBERON:0009117,2.95e-07,21;UBERON:0005564,2.95e-07,21;UBERON:0004176,5.74e-07,22;UBERON:0003101,5.74e-07,22;UBERON:0000079,5.74e-07,22 | |||
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| ||
|short_description=p4@NKX2-8 | |short_description=p4@NKX2-8 | ||
}} | }} |
Latest revision as of 22:46, 19 September 2015
Short description: | p4@NKX2-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NKX2-8_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 6bp_to_NM_014360, uc001wtx.2_5end |
EntrezGene: | NKX2-8 |
HGNC: | 16364 |
UniProt: | O15522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.61e-34 | 1 |
right lung lobe | 3.61e-34 | 1 |
lower lobe of lung | 3.61e-34 | 1 |
lobe of lung | 3.61e-34 | 1 |
right lung | 3.61e-34 | 1 |
testis | 2.01e-17 | 8 |
male reproductive organ | 5.76e-13 | 11 |
gonad | 2.95e-07 | 21 |
indifferent external genitalia | 2.95e-07 | 21 |
indifferent gonad | 2.95e-07 | 21 |
gonad primordium | 2.95e-07 | 21 |
external genitalia | 5.74e-07 | 22 |
male organism | 5.74e-07 | 22 |
male reproductive system | 5.74e-07 | 22 |