FFCP PHASE1:Hg19::chr3:193745018..193745023,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:193745018..193745023,- | |||
|coexpression_cluster_id=C2061 | |coexpression_cluster_id=C2061 | ||
|description=CAGE_peak_at_chr3:193745018..193745023,- | |description=CAGE_peak_at_chr3:193745018..193745023,- | ||
|id=chr3:193745018..193745023,- | |id=chr3:193745018..193745023,- | ||
|ontology_enrichment_celltype=CL:0002076!2.28e-07!43;CL:0000223!3.72e-07!59 | |ontology_enrichment_celltype=CL:0002076!2.28e-07!43;CL:0000223!3.72e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002251;3.62e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,3.67e-08,20;CL:0000223,3.16e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.44e-17;1 | |||
|ontology_enrichment_disease=DOID:1749!9.54e-18!14;DOID:305!1.14e-07!106 | |ontology_enrichment_disease=DOID:1749!9.54e-18!14;DOID:305!1.14e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.67e-19;14!DOID:4074;8.69e-10;2!DOID:4905;8.69e-10;2!DOID:3498;8.69e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.67e-19,14;DOID:4074,8.69e-10,2;DOID:4905,8.69e-10,2;DOID:3498,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!4.95e-17!4;UBERON:0004785!4.95e-17!4;UBERON:0003729!1.24e-13!5;UBERON:0001723!1.05e-12!3;UBERON:0001033!1.05e-12!3;UBERON:0010056!1.05e-12!3;UBERON:0006562!1.78e-12!11;UBERON:0000974!6.92e-10!10;UBERON:0001042!1.21e-09!10;UBERON:0009145!1.21e-09!10;UBERON:0000166!1.22e-08!21;UBERON:0000344!1.81e-08!12;UBERON:0000161!8.18e-08!35 | |ontology_enrichment_uberon=UBERON:0003343!4.95e-17!4;UBERON:0004785!4.95e-17!4;UBERON:0003729!1.24e-13!5;UBERON:0001723!1.05e-12!3;UBERON:0001033!1.05e-12!3;UBERON:0010056!1.05e-12!3;UBERON:0006562!1.78e-12!11;UBERON:0000974!6.92e-10!10;UBERON:0001042!1.21e-09!10;UBERON:0009145!1.21e-09!10;UBERON:0000166!1.22e-08!21;UBERON:0000344!1.81e-08!12;UBERON:0000161!8.18e-08!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;8.39e-34;2!UBERON:0000997;5.26e-18;1!UBERON:0005056;5.26e-18;1!UBERON:0004176;5.26e-18;1!UBERON:0003343;7.39e-18;4!UBERON:0004785;7.39e-18;4!UBERON:0002372;9.49e-18;1!UBERON:0001961;9.49e-18;1!UBERON:0001744;9.49e-18;1!UBERON:0001042;9.49e-18;1!UBERON:0001735;9.49e-18;1!UBERON:0000974;3.08e-12;6!UBERON:0000161;1.51e-08;19!UBERON:0000166;1.51e-08;19!UBERON:0000344;3.81e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.26e-18,1;UBERON:0005056,5.26e-18,1;UBERON:0003343,7.39e-18,4;UBERON:0004785,7.39e-18,4;UBERON:0002372,1.03e-17,1;UBERON:0001961,1.03e-17,1;UBERON:0001744,1.03e-17,1;UBERON:0001735,1.03e-17,1;UBERON:0000344,3.85e-08,20;UBERON:0000974,1.05e-07,10;UBERON:0000161,1.09e-07,36;UBERON:0000166,1.89e-07,22;UBERON:0006562,6.35e-07,11 | |||
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| ||
|short_description=p@chr3:193745018..193745023,- | |short_description=p@chr3:193745018..193745023,- | ||
}} | }} |
Latest revision as of 19:35, 29 July 2015
Short description: | p@chr3:193745018..193745023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:193745018..193745023, - |
Coexpression cluster: | C2061_oral_ductal_choriocarcinoma_acantholytic_epidermoid_Lens_pharyngeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 3.67e-08 | 20 |
endodermal cell | 3.16e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.26e-18 | 1 |
external female genitalia | 5.26e-18 | 1 |
mucosa of oral region | 7.39e-18 | 4 |
respiratory system mucosa | 7.39e-18 | 4 |
tonsil | 1.03e-17 | 1 |
mucosa-associated lymphoid tissue | 1.03e-17 | 1 |
lymphoid tissue | 1.03e-17 | 1 |
tonsillar ring | 1.03e-17 | 1 |
mucosa | 3.85e-08 | 20 |
neck | 1.05e-07 | 10 |
orifice | 1.09e-07 | 36 |
oral opening | 1.89e-07 | 22 |
pharynx | 6.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.67e-19 | 14 |
pancreas adenocarcinoma | 8.69e-10 | 2 |
pancreatic carcinoma | 8.69e-10 | 2 |
pancreatic ductal adenocarcinoma | 8.69e-10 | 2 |