FFCP PHASE1:Hg19::chr11:57160328..57160370,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:57160328..57160370,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr11:57160328..57160370,- | |description=CAGE_peak_at_chr11:57160328..57160370,- | ||
|id=chr11:57160328..57160370,- | |id=chr11:57160328..57160370,- | ||
|ontology_enrichment_celltype=CL:0002541!8.11e-51!3;CL:0002537!2.76e-14!5 | |ontology_enrichment_celltype=CL:0002541!8.11e-51!3;CL:0002537!2.76e-14!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;9.40e-99;3!CL:0000349;2.58e-28;19!CL:0000723;5.53e-09;61!CL:0000134;2.27e-08;55!CL:0002537;6.13e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.95e-99,3;CL:0000349,2.49e-28,19;CL:0002537,6.13e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.05e-34;1!UBERON:0003124;8.34e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!8.11e-51!3;UBERON:0000920!8.11e-51!3;UBERON:0000478!1.09e-43!24;UBERON:0005631!1.35e-42!14;UBERON:0000158!1.35e-42!14;UBERON:0003124!1.73e-38!7;UBERON:0000305!1.77e-10!7;UBERON:0004923!2.21e-10!57;UBERON:0004871!2.77e-09!8;UBERON:0002331!1.42e-07!10;UBERON:0000358!1.42e-07!10;UBERON:0000307!1.42e-07!10;UBERON:0000091!1.42e-07!10;UBERON:0000087!1.42e-07!10;UBERON:0007806!1.42e-07!10;UBERON:0008780!1.42e-07!10;UBERON:0005728!1.42e-07!10 | |ontology_enrichment_uberon=UBERON:0000476!8.11e-51!3;UBERON:0000920!8.11e-51!3;UBERON:0000478!1.09e-43!24;UBERON:0005631!1.35e-42!14;UBERON:0000158!1.35e-42!14;UBERON:0003124!1.73e-38!7;UBERON:0000305!1.77e-10!7;UBERON:0004923!2.21e-10!57;UBERON:0004871!2.77e-09!8;UBERON:0002331!1.42e-07!10;UBERON:0000358!1.42e-07!10;UBERON:0000307!1.42e-07!10;UBERON:0000091!1.42e-07!10;UBERON:0000087!1.42e-07!10;UBERON:0007806!1.42e-07!10;UBERON:0008780!1.42e-07!10;UBERON:0005728!1.42e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.40e-99;3!UBERON:0000920;9.40e-99;3!UBERON:0005631;4.93e-53;10!UBERON:0000158;4.93e-53;10!UBERON:0000478;1.68e-49;24!UBERON:0001987;1.63e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.95e-99,3;UBERON:0003124,3.86e-75,7;UBERON:0005631,7.71e-59,14;UBERON:0000158,7.71e-59,14;UBERON:0000478,1.68e-49,24;UBERON:0004923,5.70e-13,66;UBERON:0001987,1.70e-09,4;UBERON:0004340,1.70e-09,4 | |||
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|short_description=p@chr11:57160328..57160370,- | |short_description=p@chr11:57160328..57160370,- | ||
}} | }} |
Latest revision as of 22:55, 23 July 2015
Short description: | p@chr11:57160328..57160370, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57160328..57160370, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.95e-99 | 3 |
extraembryonic cell | 2.49e-28 | 19 |
amnion mesenchymal stem cell | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.95e-99 | 3 |
chorion | 3.86e-75 | 7 |
extraembryonic membrane | 7.71e-59 | 14 |
membranous layer | 7.71e-59 | 14 |
extraembryonic structure | 1.68e-49 | 24 |
organ component layer | 5.70e-13 | 66 |
placenta | 1.70e-09 | 4 |
allantois | 1.70e-09 | 4 |