FFCP PHASE1:Hg19::chr6:111067964..111067988,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:111067964..111067988,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_at_chr6:111067964..111067988,- | |description=CAGE_peak_at_chr6:111067964..111067988,- | ||
|id=chr6:111067964..111067988,- | |id=chr6:111067964..111067988,- | ||
|ontology_enrichment_celltype=CL:0000181!8.39e-14!12;CL:0000417!8.39e-14!12;CL:0000668!8.39e-14!12;CL:0000414!8.39e-14!12;CL:0000412!8.39e-14!12;CL:0000182!8.39e-14!12;CL:0000313!8.51e-08!1 | |ontology_enrichment_celltype=CL:0000181!8.39e-14!12;CL:0000417!8.39e-14!12;CL:0000668!8.39e-14!12;CL:0000414!8.39e-14!12;CL:0000412!8.39e-14!12;CL:0000182!8.39e-14!12;CL:0000313!8.51e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.09e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.61e-32;11!UBERON:0009497;1.31e-27;13!UBERON:0006242;5.13e-23;1!UBERON:0003104;2.95e-11;31!UBERON:0009117;8.46e-10;10!UBERON:0005564;8.46e-10;10!UBERON:0001041;2.39e-07;30 | |||
|ontology_enrichment_disease=DOID:2152!8.51e-08!1 | |ontology_enrichment_disease=DOID:2152!8.51e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.32e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!4.02e-09!25;UBERON:0000015!4.02e-09!25;UBERON:0002423!4.02e-09!25;UBERON:0006235!4.02e-09!25;UBERON:0004161!4.02e-09!25;UBERON:0002107!1.24e-08!19;UBERON:0006925!1.24e-08!19;UBERON:0008836!1.24e-08!19;UBERON:0004911!8.51e-08!1;UBERON:0001871!1.02e-07!7;UBERON:0001301!1.35e-07!1;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1;UBERON:0008835!2.03e-07!22;UBERON:0003894!2.03e-07!22;UBERON:0009854!4.38e-07!23;UBERON:0003929!9.84e-07!54 | |ontology_enrichment_uberon=UBERON:0009497!4.02e-09!25;UBERON:0000015!4.02e-09!25;UBERON:0002423!4.02e-09!25;UBERON:0006235!4.02e-09!25;UBERON:0004161!4.02e-09!25;UBERON:0002107!1.24e-08!19;UBERON:0006925!1.24e-08!19;UBERON:0008836!1.24e-08!19;UBERON:0004911!8.51e-08!1;UBERON:0001871!1.02e-07!7;UBERON:0001301!1.35e-07!1;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1;UBERON:0008835!2.03e-07!22;UBERON:0003894!2.03e-07!22;UBERON:0009854!4.38e-07!23;UBERON:0003929!9.84e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.33e-14;25!UBERON:0000473;5.22e-12;8!UBERON:0002107;2.98e-11;19!UBERON:0006925;2.98e-11;19!UBERON:0003135;5.41e-09;11!UBERON:0002110;1.40e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.38e-14,25;UBERON:0000015,1.38e-14,25;UBERON:0002423,1.38e-14,25;UBERON:0006235,1.38e-14,25;UBERON:0004161,1.38e-14,25;UBERON:0000473,5.22e-12,8;UBERON:0002107,2.98e-11,19;UBERON:0006925,2.98e-11,19;UBERON:0008836,2.98e-11,19;UBERON:0008835,8.34e-10,22;UBERON:0003894,8.34e-10,22;UBERON:0009854,2.09e-09,23;UBERON:0003135,5.41e-09,11;UBERON:0007499,1.06e-08,25;UBERON:0002110,1.51e-08,3;UBERON:0006242,1.51e-08,3;UBERON:0009856,2.17e-08,26;UBERON:0002365,3.95e-07,31;UBERON:0002330,3.95e-07,31;UBERON:0003929,6.01e-07,54;UBERON:0005172,6.01e-07,54;UBERON:0005173,6.01e-07,54 | |||
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|short_description=p@chr6:111067964..111067988,- | |short_description=p@chr6:111067964..111067988,- | ||
}} | }} |
Latest revision as of 18:15, 30 July 2015
Short description: | p@chr6:111067964..111067988, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:111067964..111067988, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.38e-14 | 25 |
anatomical boundary | 1.38e-14 | 25 |
hepatobiliary system | 1.38e-14 | 25 |
foregut-midgut junction | 1.38e-14 | 25 |
septum transversum | 1.38e-14 | 25 |
testis | 5.22e-12 | 8 |
liver | 2.98e-11 | 19 |
digestive gland | 2.98e-11 | 19 |
liver bud | 2.98e-11 | 19 |
hepatic diverticulum | 8.34e-10 | 22 |
liver primordium | 8.34e-10 | 22 |
digestive tract diverticulum | 2.09e-09 | 23 |
male reproductive organ | 5.41e-09 | 11 |
epithelial sac | 1.06e-08 | 25 |
gallbladder | 1.51e-08 | 3 |
gall bladder primordium | 1.51e-08 | 3 |
sac | 2.17e-08 | 26 |
exocrine gland | 3.95e-07 | 31 |
exocrine system | 3.95e-07 | 31 |
gut epithelium | 6.01e-07 | 54 |
abdomen element | 6.01e-07 | 54 |
abdominal segment element | 6.01e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.32e-12 | 2 |