FFCP PHASE1:Hg19::chr1:153091938..153091951,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153091938..153091951,- | |||
|coexpression_cluster_id=C3868 | |coexpression_cluster_id=C3868 | ||
|description=CAGE_peak_at_chr1:153091938..153091951,- | |description=CAGE_peak_at_chr1:153091938..153091951,- | ||
|id=chr1:153091938..153091951,- | |id=chr1:153091938..153091951,- | ||
|ontology_enrichment_celltype=CL:0000632!1.21e-10!2;CL:0000764!8.33e-10!2;CL:0000765!8.33e-10!2;CL:0000050!8.33e-10!2;CL:0000038!8.33e-10!2;CL:0000558!8.33e-10!2;CL:0000547!8.33e-10!2;CL:0000549!8.33e-10!2;CL:0000550!8.33e-10!2;CL:0000552!8.33e-10!2;CL:0000174!2.56e-07!3 | |ontology_enrichment_celltype=CL:0000632!1.21e-10!2;CL:0000764!8.33e-10!2;CL:0000765!8.33e-10!2;CL:0000050!8.33e-10!2;CL:0000038!8.33e-10!2;CL:0000558!8.33e-10!2;CL:0000547!8.33e-10!2;CL:0000549!8.33e-10!2;CL:0000550!8.33e-10!2;CL:0000552!8.33e-10!2;CL:0000174!2.56e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000632;3.11e-21;3!CL:0000174;5.19e-21;3!CL:0000077;2.52e-20;19!CL:0002174;2.84e-16;1!CL:0000501;2.84e-16;1!CL:0002097;6.42e-09;2!CL:0000163;1.23e-07;9!CL:0000151;1.72e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,3.28e-21,3;CL:0000174,4.46e-21,3;CL:0000077,2.42e-20,19;CL:0002174,2.63e-16,1;CL:0000501,2.63e-16,1;CL:0002097,5.94e-09,2;CL:0000163,1.17e-07,9;CL:0000151,5.03e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.85e-14;10!UBERON:0005564;1.85e-14;10 | |||
|ontology_enrichment_disease=DOID:1036!1.85e-09!8 | |ontology_enrichment_disease=DOID:1036!1.85e-09!8 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.37e-08;8!UBERON:0000991;3.49e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.42e-08,8;UBERON:0000991,3.57e-07,21;UBERON:0009196,3.57e-07,21;UBERON:0009117,3.57e-07,21;UBERON:0005564,3.57e-07,21;UBERON:0004176,7.18e-07,22 | |||
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| ||
|short_description=p@chr1:153091938..153091951,- | |short_description=p@chr1:153091938..153091951,- | ||
}} | }} |
Latest revision as of 21:39, 27 July 2015
Short description: | p@chr1:153091938..153091951, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153091938..153091951, - |
Coexpression cluster: | C3868_mesothelioma_Mesothelial_ovary_Hepatic_testis_chronic_granulosa |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 3.28e-21 | 3 |
steroid hormone secreting cell | 4.46e-21 | 3 |
mesothelial cell | 2.42e-20 | 19 |
follicular cell of ovary | 2.63e-16 | 1 |
granulosa cell | 2.63e-16 | 1 |
cortical cell of adrenal gland | 5.94e-09 | 2 |
endocrine cell | 1.17e-07 | 9 |
secretory cell | 5.03e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
testis | 1.42e-08 | 8 |
gonad | 3.57e-07 | 21 |
indifferent external genitalia | 3.57e-07 | 21 |
indifferent gonad | 3.57e-07 | 21 |
gonad primordium | 3.57e-07 | 21 |
external genitalia | 7.18e-07 | 22 |