FFCP PHASE1:Hg19::chr12:56347974..56347983,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-90bp_to_ENST00000554053_5end | |association_with_transcript=-90bp_to_ENST00000554053_5end | ||
|cluster_id=chr12:56347974..56347983,- | |||
|coexpression_cluster_id=C206 | |coexpression_cluster_id=C206 | ||
|description=CAGE_peak_4_at_ENST00000554053_5end | |description=CAGE_peak_4_at_ENST00000554053_5end | ||
|id=chr12:56347974..56347983,- | |id=chr12:56347974..56347983,- | ||
|ontology_enrichment_celltype=CL:0000147!1.20e-28!14;CL:0000149!6.73e-26!4;CL:0002566!7.62e-26!1;CL:0000148!6.92e-23!10;CL:0000541!6.92e-23!10;CL:0000710!7.97e-12!20;CL:0000325!1.29e-10!39;CL:0002586!1.19e-09!3;CL:0000075!6.23e-09!27;CL:0002077!2.03e-07!33;CL:0000133!6.47e-07!59 | |ontology_enrichment_celltype=CL:0000147!1.20e-28!14;CL:0000149!6.73e-26!4;CL:0002566!7.62e-26!1;CL:0000148!6.92e-23!10;CL:0000541!6.92e-23!10;CL:0000710!7.97e-12!20;CL:0000325!1.29e-10!39;CL:0002586!1.19e-09!3;CL:0000075!6.23e-09!27;CL:0002077!2.03e-07!33;CL:0000133!6.47e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000149;7.14e-26;4!CL:0000148;3.02e-11;10!CL:0000147;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000149,7.14e-26,4;CL:0000148,3.02e-11,10;CL:0000541,3.02e-11,10;CL:0000147,2.00e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!6.43e-14!2 | |ontology_enrichment_disease=DOID:1909!6.43e-14!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.74e-50;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.74e-50,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.10e-20!5;UBERON:0005388!1.10e-20!5;UBERON:0001802!1.10e-20!5;UBERON:0000970!8.27e-12!20;UBERON:0002104!2.80e-11!21;UBERON:0000020!2.34e-10!23;UBERON:0001032!5.92e-10!24;UBERON:0004456!5.92e-10!24;UBERON:0001781!1.19e-09!3;UBERON:0001782!1.19e-09!3;UBERON:0005424!1.19e-09!3 | |ontology_enrichment_uberon=UBERON:0000966!1.10e-20!5;UBERON:0005388!1.10e-20!5;UBERON:0001802!1.10e-20!5;UBERON:0000970!8.27e-12!20;UBERON:0002104!2.80e-11!21;UBERON:0000020!2.34e-10!23;UBERON:0001032!5.92e-10!24;UBERON:0004456!5.92e-10!24;UBERON:0001781!1.19e-09!3;UBERON:0001782!1.19e-09!3;UBERON:0005424!1.19e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p4@ENST00000554053 | |short_description=p4@ENST00000554053 | ||
}} | }} |
Latest revision as of 10:15, 24 July 2015
Short description: | p4@ENST00000554053 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000554053_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -90bp_to_ENST00000554053_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visual pigment cell | 7.14e-26 | 4 |
melanocyte | 3.02e-11 | 10 |
melanoblast | 3.02e-11 | 10 |
pigment cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.74e-50 | 2 |