FFCP PHASE1:Hg19::chr4:174254760..174254775,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3148 | |EntrezGene=3148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5000 | |HGNC=5000 | ||
|TSSclassifier=strong | |||
|UniProt=P26583,Q5U071 | |UniProt=P26583,Q5U071 | ||
|association_with_transcript=24bp_to_BT019782,BT019783_5end | |association_with_transcript=24bp_to_BT019782,BT019783_5end | ||
|cluster_id=chr4:174254760..174254775,- | |||
|coexpression_cluster_id=C1519 | |coexpression_cluster_id=C1519 | ||
|description=CAGE_peak_4_at_HMGB2_5end | |description=CAGE_peak_4_at_HMGB2_5end | ||
|id=chr4:174254760..174254775,- | |id=chr4:174254760..174254775,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.25e-26!235;DOID:14566!3.98e-26!239;DOID:2531!3.51e-20!51;DOID:0060083!3.51e-20!51;DOID:1240!8.70e-16!39;DOID:0050686!6.45e-14!137;DOID:8692!1.80e-11!31;DOID:0050687!7.03e-10!143;DOID:305!6.18e-08!106 | |ontology_enrichment_disease=DOID:162!1.25e-26!235;DOID:14566!3.98e-26!239;DOID:2531!3.51e-20!51;DOID:0060083!3.51e-20!51;DOID:1240!8.70e-16!39;DOID:0050686!6.45e-14!137;DOID:8692!1.80e-11!31;DOID:0050687!7.03e-10!143;DOID:305!6.18e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.61e-16;39!DOID:2531;2.23e-15;51!DOID:0060083;2.23e-15;51!DOID:8692;6.83e-15;31!DOID:0060058;2.48e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.27e-25,235;DOID:2531,1.88e-25,51;DOID:0060083,1.88e-25,51;DOID:14566,3.61e-25,239;DOID:1240,1.93e-20,39;DOID:8692,5.95e-15,31;DOID:0050686,7.85e-14,137;DOID:0050687,1.42e-08,143;DOID:0060058,3.43e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.655324116390517,0,1.36142988256051,0.994192127183747,0,0.602694528023977,0,0.487932798790507,0.984968464614303,1.02000345622126,0.313454721478088,3.14859585844162,8.75996320466459,3.51519390865448,5.65459202534839,3.7766271146975,4.95877922276179,0.393364276848904,0.767658796194425,0.619264493264304,0.919421224478927,0,0,4.26069603191659,3.41206157969812,1.76160263600908,0,2.4065333696417,1.51907609501096,0,0,0.257575567634187,3.34415949192999,0,0.727752183563449,0.697287110717054,2.87817521615278,0,0.575384784644301,0.768482119587302,0.47296445977717,0.344745680736619,1.29096936716765,0,1.50593871634084,0.545812300115692,0.224723484445085,1.53041946185451,0.641858054152187,1.27867425159808,0.329851300186716,0.199463657621632,0,0.580418477257168,0.56738522469114,0,0.251248665256743,1.5644487552606,0.434377689410233,1.81619850790011,0.368277635987565,0.949387162322653,0.845021145247767,0.425208599930087,0.419317291016752,1.57260083605093,1.80212271409808,2.08943262706204,0.285012743741249,1.39241674039363,0.730656615058536,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0,1.76171156811282,0.764546456250458,0,0,1.84368859342554,0.393419540227666,3.14408610199332,1.43921049299656,0.668745981562712,0.977766799900771,1.89379122293893,3.89653456815823,1.11410456885174,3.53527088969805,2.65840673500345,1.08321545506006,4.22701355094728,5.07231455483525,5.75532666112866,7.73780049800375,2.31842468588042,1.33457906845854,2.1403266247177,1.04535523804977,2.94604291013672,3.06576394881537,1.37450978193052,1.26509846009751,0.95569624297229,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0,0,0.604820229674197,4.01160293675261,1.01377082717959,0,1.34140171940727,0.383587685530591,0,0,1.59331170856906,0,0.973269740605272,2.55244006342983,5.98669373148923,2.72287835648691,0.523916301990851,0,1.11235332835329,0,0,0.26591592103773,0,0,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0,1.37559020970034,0.208994966536811,0,0,0,0,0.760272105718513,0.976248230192678,0,0.81014194788176,3.03619076165871,4.26605807989723,1.91439516821648,0,0,1.28241220751285,0,0,0.436094052142534,0.993943903390637,1.13967460498122,0.264818361626438,0.860509862246441,3.54668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,1.88594940897563,0.980771418680752,0,0.576175924479999,0.468642863667593,0,0,1.19558944441441,4.22764195117554,2.5899671098901,1.26405726032024,0,5.77321291365309,0.413303124703062,0,1.48360157567134,0,0,1.68336113954066,4.8796222750066,0,0.877955241761676,1.83892677479412,0.45071417671979,0.907457465280168,0.717558542755448,0.213557388818567,0.423863802319124,0.300091096084402,0.515262646192195,0.515281080091258,0.744467425326359,0.168776332241266,0.487185025805993,0.252433774244115,0.368199594569197,0.161646056818812,0.710019185033229,0.604512589365842,1.86516651541536,0,0,0,4.51302712679503,2.51806559810822,2.20768491452085,3.10983165046111,3.28017106138317,7.66452454059243,0,0,0,2.3218396401599,1.44375896333917,1.30137480043828,1.85443159085912,1.20505514941741,1.32352767278873,1.74303555273925,1.89816495288877,2.96628877952362,0.98110732562673,1.53898862778556,1.4763109092493,0,0.4115740113314,0,1.26755034821831,0,0,13.6853560818542,1.47586126251736,0.686271241194102,0,0,2.21163739305588,1.38882667737794,0.325808305310325,0,4.3299402607582,0.811512834825538,0.117408694235822,1.58803092537181,1.38895653772983,4.18559134916116,0,1.71697232418975,0,0,0.743155811443641,0,0.16798212819886,0.283550194484773,0.895585227028483,2.3250715081117,0.766765358330422,2.95597942737566,0.44024217006613,0.414656231081544,0.720599767084807,0.25248486685276,0.63497894292169,0.381988425558278,0,1.71072446022705,1.54241239054985,1.50171528921959,0,0.224262168690721,0,0.8800594298514,0,0,1.690605505112,0.531876233169741,0,0.514414748524284,0,0,0.57191197463259,0,0.823240336780769,0.65147236858747,0.355391948742546,5.543663110534,0.301439377059586,0,0.199945982364114,0,0,2.10833939483032,0.479249710983165,0,4.27910715122155,0.289562613335158,0.410952645100767,0.895304816199478,13.3381321352297,0.197030760201927,4.52817907204986,1.79680250791648,0.508189248444927,0,3.09315525111078,0.502548796003046,1.91381625495949,0.749007023947182,8.97484377612075,0.828831026872071,0.858840442033979,1.00034104211935,0.271265023699736,0.623912584592421,2.49800584316026,0.630809660135739,0.35142424497814,0.300946099727719,0,0,2.65690239414175,0.553107505625109,1.21637060255316,0,0,0.413536052245775,3.23571301227925,1.28073069364133,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,0.511707249066704,0.160853921143607,0,2.7757744884478,0.887808626565635,0.492762936082855,2.59627214591811,1.74315567689939,1.57117284469109,0.200506470303285,1.01289087829486,1.7222167224691,7.4657378882754,1.04899531967539,0.451199612907412,0.847168708148562,0,0,1.37217117560738,1.13733384070897,1.020562231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| ||
|short_description=p4@HMGB2 | |short_description=p4@HMGB2 | ||
}} | }} |
Latest revision as of 19:05, 16 September 2015
Short description: | p4@HMGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HMGB2_5end |
Coexpression cluster: | C1519_diffuse_acute_chronic_NK_testicular_Reticulocytes_small |
Association with transcript: | 24bp_to_BT019782, BT019783_5end |
EntrezGene: | HMGB2 |
HGNC: | 5000 |
UniProt: | P26583Q5U071 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 1.27e-25 | 235 |
hematologic cancer | 1.88e-25 | 51 |
immune system cancer | 1.88e-25 | 51 |
disease of cellular proliferation | 3.61e-25 | 239 |
leukemia | 1.93e-20 | 39 |
myeloid leukemia | 5.95e-15 | 31 |
organ system cancer | 7.85e-14 | 137 |
cell type cancer | 1.42e-08 | 143 |
lymphoma | 3.43e-07 | 10 |