FFCP PHASE1:Hg19::chr2:12454437..12454450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000412606_5end | |association_with_transcript=0bp_to_ENST00000412606_5end | ||
|cluster_id=chr2:12454437..12454450,+ | |||
|coexpression_cluster_id=C897 | |coexpression_cluster_id=C897 | ||
|description=CAGE_peak_1_at_ENST00000412606_5end | |description=CAGE_peak_1_at_ENST00000412606_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!6.96e-16!10;CL:0000541!6.96e-16!10;CL:0000147!5.40e-11!14;CL:0002567!6.83e-11!3;CL:0002274!3.45e-10!5;CL:0000457!3.45e-10!5;CL:0002191!3.45e-10!5;CL:0000097!3.45e-10!5;CL:0000831!3.45e-10!5;CL:0002028!3.45e-10!5;CL:0000710!2.46e-07!20 | |ontology_enrichment_celltype=CL:0000148!6.96e-16!10;CL:0000541!6.96e-16!10;CL:0000147!5.40e-11!14;CL:0002567!6.83e-11!3;CL:0002274!3.45e-10!5;CL:0000457!3.45e-10!5;CL:0002191!3.45e-10!5;CL:0000097!3.45e-10!5;CL:0000831!3.45e-10!5;CL:0002028!3.45e-10!5;CL:0000710!2.46e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.01e-74;10!CL:0000147;5.31e-53;14!CL:0002567;3.06e-46;3!CL:0000710;4.81e-37;20!CL:0000075;2.25e-27;27!CL:0002077;3.68e-19;34!CL:0002566;1.21e-16;1!CL:0000047;8.09e-09;2 | |ontology_enrichment_celltype_v019=CL:0000148;3.01e-74;10!CL:0000147;5.31e-53;14!CL:0002567;3.06e-46;3!CL:0000710;4.81e-37;20!CL:0000075;2.25e-27;27!CL:0002077;3.68e-19;34!CL:0002566;1.21e-16;1!CL:0000047;8.09e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.01e-74,10;CL:0000541,3.01e-74,10;CL:0000147,5.31e-53,14;CL:0002567,3.06e-46,3;CL:0000710,4.81e-37,20;CL:0000075,2.25e-27,27;CL:0002077,1.13e-21,34;CL:0000333,4.62e-17,41;CL:0002566,1.21e-16,1;CL:0000133,2.00e-15,59;CL:0000221,1.32e-12,72 | |||
|ontology_enrichment_development_v019=CL:0000133;4.94e-09;59 | |ontology_enrichment_development_v019=CL:0000133;4.94e-09;59 | ||
|ontology_enrichment_disease=DOID:1909!5.87e-08!2 | |ontology_enrichment_disease=DOID:1909!5.87e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.92e-32;2!DOID:5662;2.63e-16;1 | |ontology_enrichment_disease_v019=DOID:1909;3.92e-32;2!DOID:5662;2.63e-16;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,3.92e-32,2;DOID:5662,2.25e-16,1 | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000412606 | |short_description=p1@ENST00000412606 | ||
}} | }} |
Latest revision as of 00:01, 29 July 2015
Short description: | p1@ENST00000412606 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412606_5end |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | 0bp_to_ENST00000412606_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.01e-74 | 10 |
melanoblast | 3.01e-74 | 10 |
pigment cell | 5.31e-53 | 14 |
light melanocyte | 3.06e-46 | 3 |
neurecto-epithelial cell | 4.81e-37 | 20 |
columnar/cuboidal epithelial cell | 2.25e-27 | 27 |
ecto-epithelial cell | 1.13e-21 | 34 |
migratory neural crest cell | 4.62e-17 | 41 |
dark melanocyte | 1.21e-16 | 1 |
neurectodermal cell | 2.00e-15 | 59 |
ectodermal cell | 1.32e-12 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.92e-32 | 2 |
pleomorphic carcinoma | 2.25e-16 | 1 |