FFCP PHASE1:Hg19::chr1:208084709..208084727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=947 | |EntrezGene=947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1662 | |HGNC=1662 | ||
|TSSclassifier=strong | |||
|UniProt=P28906 | |UniProt=P28906 | ||
|association_with_transcript=19bp_to_ENST00000310833,ENST00000356522_5end | |association_with_transcript=19bp_to_ENST00000310833,ENST00000356522_5end | ||
|cluster_id=chr1:208084709..208084727,- | |||
|coexpression_cluster_id=C3929 | |coexpression_cluster_id=C3929 | ||
|description=CAGE_peak_6_at_CD34_5end | |description=CAGE_peak_6_at_CD34_5end | ||
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|ontology_enrichment_celltype=CL:0000115!3.69e-12!35;CL:0002139!9.23e-11!24;CL:0002078!2.56e-08!44;CL:0000071!4.43e-07!18;CL:0002546!4.43e-07!18 | |ontology_enrichment_celltype=CL:0000115!3.69e-12!35;CL:0002139!9.23e-11!24;CL:0002078!2.56e-08!44;CL:0000071!4.43e-07!18;CL:0002546!4.43e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002188;1.44e-09;5!CL:0000115;1.34e-07;36!CL:0002262;5.71e-07;2!CL:1000398;5.71e-07;2!CL:1000746;8.16e-07;7!CL:1000612;8.16e-07;7 | |ontology_enrichment_celltype_v019=CL:0002188;1.44e-09;5!CL:0000115;1.34e-07;36!CL:0002262;5.71e-07;2!CL:1000398;5.71e-07;2!CL:1000746;8.16e-07;7!CL:1000612;8.16e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.04e-09,5;CL:0000115,7.20e-09,36;CL:0002262,4.68e-07,2;CL:1000398,4.68e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-45!115;UBERON:0001049!3.05e-24!57;UBERON:0005068!3.05e-24!57;UBERON:0006241!3.05e-24!57;UBERON:0007135!3.05e-24!57;UBERON:0003080!9.53e-21!42;UBERON:0002616!1.62e-20!59;UBERON:0002780!6.05e-20!41;UBERON:0001890!6.05e-20!41;UBERON:0006240!6.05e-20!41;UBERON:0003075!1.74e-18!86;UBERON:0007284!1.74e-18!86;UBERON:0001893!6.39e-18!34;UBERON:0002020!9.04e-18!34;UBERON:0003528!9.04e-18!34;UBERON:0002791!3.52e-17!33;UBERON:0002346!5.14e-17!90;UBERON:0001869!1.85e-16!32;UBERON:0001017!2.07e-16!82;UBERON:0000955!2.84e-16!69;UBERON:0006238!2.84e-16!69;UBERON:0005743!4.67e-16!86;UBERON:0004111!1.08e-15!241;UBERON:0000025!4.29e-15!194;UBERON:0000073!2.73e-13!94;UBERON:0001016!2.73e-13!94;UBERON:0003056!4.02e-13!61;UBERON:0000477!4.03e-13!286;UBERON:0000956!1.27e-12!25;UBERON:0000203!1.27e-12!25;UBERON:0002619!7.76e-11!22;UBERON:0001950!8.02e-11!20;UBERON:0000153!6.73e-10!129;UBERON:0007811!6.73e-10!129;UBERON:0000033!1.56e-08!123;UBERON:0002298!7.85e-08!8;UBERON:0000064!2.46e-07!219;UBERON:0000483!2.49e-07!309;UBERON:0001986!4.43e-07!18;UBERON:0004638!4.43e-07!18;UBERON:0004852!4.43e-07!18;UBERON:0000119!4.53e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!2.42e-45!115;UBERON:0001049!3.05e-24!57;UBERON:0005068!3.05e-24!57;UBERON:0006241!3.05e-24!57;UBERON:0007135!3.05e-24!57;UBERON:0003080!9.53e-21!42;UBERON:0002616!1.62e-20!59;UBERON:0002780!6.05e-20!41;UBERON:0001890!6.05e-20!41;UBERON:0006240!6.05e-20!41;UBERON:0003075!1.74e-18!86;UBERON:0007284!1.74e-18!86;UBERON:0001893!6.39e-18!34;UBERON:0002020!9.04e-18!34;UBERON:0003528!9.04e-18!34;UBERON:0002791!3.52e-17!33;UBERON:0002346!5.14e-17!90;UBERON:0001869!1.85e-16!32;UBERON:0001017!2.07e-16!82;UBERON:0000955!2.84e-16!69;UBERON:0006238!2.84e-16!69;UBERON:0005743!4.67e-16!86;UBERON:0004111!1.08e-15!241;UBERON:0000025!4.29e-15!194;UBERON:0000073!2.73e-13!94;UBERON:0001016!2.73e-13!94;UBERON:0003056!4.02e-13!61;UBERON:0000477!4.03e-13!286;UBERON:0000956!1.27e-12!25;UBERON:0000203!1.27e-12!25;UBERON:0002619!7.76e-11!22;UBERON:0001950!8.02e-11!20;UBERON:0000153!6.73e-10!129;UBERON:0007811!6.73e-10!129;UBERON:0000033!1.56e-08!123;UBERON:0002298!7.85e-08!8;UBERON:0000064!2.46e-07!219;UBERON:0000483!2.49e-07!309;UBERON:0001986!4.43e-07!18;UBERON:0004638!4.43e-07!18;UBERON:0004852!4.43e-07!18;UBERON:0000119!4.53e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.71e-07;2!UBERON:0003497;5.71e-07;2!UBERON:0003909;5.71e-07;2!UBERON:0003835;5.71e-07;2!UBERON:0000074;8.16e-07;7!UBERON:0001229;8.16e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001281;5.71e-07;2!UBERON:0003497;5.71e-07;2!UBERON:0003909;5.71e-07;2!UBERON:0003835;5.71e-07;2!UBERON:0000074;8.16e-07;7!UBERON:0001229;8.16e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.72e-11,114;UBERON:0003103,2.07e-08,68;UBERON:0001281,4.68e-07,2;UBERON:0003497,4.68e-07,2;UBERON:0003909,4.68e-07,2;UBERON:0003835,4.68e-07,2 | |||
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|short_description=p6@CD34 | |short_description=p6@CD34 | ||
}} | }} |
Latest revision as of 17:17, 24 September 2015
Short description: | p6@CD34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD34_5end |
Coexpression cluster: | C3929_clear_Renal_acute_CD133_placenta_CD34_diaphragm |
Association with transcript: | 19bp_to_ENST00000310833, ENST00000356522_5end |
EntrezGene: | CD34 |
HGNC: | 1662 |
UniProt: | P28906 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.04e-09 | 5 |
endothelial cell | 7.20e-09 | 36 |
endothelial cell of sinusoid | 4.68e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.72e-11 | 114 |
compound organ | 2.07e-08 | 68 |
hepatic sinusoid | 4.68e-07 | 2 |
abdomen blood vessel | 4.68e-07 | 2 |
sinusoid | 4.68e-07 | 2 |
abdominal segment blood vessel | 4.68e-07 | 2 |