FFCP PHASE1:Hg19::chr1:45970787..45970791,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:45970787..45970791,- | |||
|description=CAGE_peak_at_chr1:45970787..45970791,- | |description=CAGE_peak_at_chr1:45970787..45970791,- | ||
|id=chr1:45970787..45970791,- | |id=chr1:45970787..45970791,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000083;1.20e-13;4!CL:0002535;1.16e-07;2 | |ontology_enrichment_celltype_v019=CL:0000083;1.20e-13;4!CL:0002535;1.16e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000083,2.72e-13,4;CL:0000066,1.50e-08,253;CL:0002535,2.61e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!6.40e-56!239;DOID:162!1.04e-55!235;DOID:0050687!1.03e-45!143;DOID:305!8.14e-35!106;DOID:0050686!9.40e-27!137;DOID:1749!1.07e-15!14;DOID:3095!7.19e-11!22;DOID:2994!7.19e-11!22;DOID:170!5.38e-08!6;DOID:2531!1.16e-07!51;DOID:0060083!1.16e-07!51;DOID:299!2.07e-07!25;DOID:7!2.96e-07!39 | |ontology_enrichment_disease=DOID:14566!6.40e-56!239;DOID:162!1.04e-55!235;DOID:0050687!1.03e-45!143;DOID:305!8.14e-35!106;DOID:0050686!9.40e-27!137;DOID:1749!1.07e-15!14;DOID:3095!7.19e-11!22;DOID:2994!7.19e-11!22;DOID:170!5.38e-08!6;DOID:2531!1.16e-07!51;DOID:0060083!1.16e-07!51;DOID:299!2.07e-07!25;DOID:7!2.96e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.25e-18;14!DOID:170;3.85e-14;6!DOID:1793;1.20e-13;4!DOID:0050687;3.06e-09;143!DOID:305;2.48e-08;106!DOID:4074;1.16e-07;2!DOID:4905;1.16e-07;2!DOID:4468;1.16e-07;2!DOID:3498;1.16e-07;2!DOID:7;1.67e-07;39!DOID:4362;8.54e-07;5 | |ontology_enrichment_disease_v019=DOID:1749;2.25e-18;14!DOID:170;3.85e-14;6!DOID:1793;1.20e-13;4!DOID:0050687;3.06e-09;143!DOID:305;2.48e-08;106!DOID:4074;1.16e-07;2!DOID:4905;1.16e-07;2!DOID:4468;1.16e-07;2!DOID:3498;1.16e-07;2!DOID:7;1.67e-07;39!DOID:4362;8.54e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.19e-33,143;DOID:305,1.89e-32,106;DOID:162,2.83e-32,235;DOID:14566,2.33e-31,239;DOID:1749,1.20e-18,14;DOID:170,7.34e-14,6;DOID:1793,2.72e-13,4;DOID:0050686,4.78e-09,137;DOID:7,2.47e-08,39;DOID:4074,1.39e-07,2;DOID:4905,1.39e-07,2;DOID:3498,1.39e-07,2;DOID:4468,1.76e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!7.34e-07!12 | |ontology_enrichment_uberon=UBERON:0000344!7.34e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;4.20e-08;4!UBERON:0004785;4.20e-08;4!UBERON:0006955;1.16e-07;2!UBERON:0004801;1.16e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003343;4.20e-08;4!UBERON:0004785;4.20e-08;4!UBERON:0006955;1.16e-07;2!UBERON:0004801;1.16e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.06e-08,4;UBERON:0004785,5.06e-08,4;UBERON:0006955,2.61e-07,2;UBERON:0004801,2.61e-07,2 | |||
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|short_description=p@chr1:45970787..45970791,- | |short_description=p@chr1:45970787..45970791,- | ||
}} | }} |
Latest revision as of 08:41, 28 July 2015
Short description: | p@chr1:45970787..45970791, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:45970787..45970791, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 2.72e-13 | 4 |
epithelial cell | 1.50e-08 | 253 |
epithelial cell of cervix | 2.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.06e-08 | 4 |
respiratory system mucosa | 5.06e-08 | 4 |
uterine epithelium | 2.61e-07 | 2 |
cervix epithelium | 2.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.19e-33 | 143 |
carcinoma | 1.89e-32 | 106 |
cancer | 2.83e-32 | 235 |
disease of cellular proliferation | 2.33e-31 | 239 |
squamous cell carcinoma | 1.20e-18 | 14 |
endocrine gland cancer | 7.34e-14 | 6 |
pancreatic cancer | 2.72e-13 | 4 |
organ system cancer | 4.78e-09 | 137 |
disease of anatomical entity | 2.47e-08 | 39 |
pancreas adenocarcinoma | 1.39e-07 | 2 |
pancreatic carcinoma | 1.39e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.39e-07 | 2 |
clear cell adenocarcinoma | 1.76e-07 | 2 |