FFCP PHASE1:Hg19::chr7:13545393..13545395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:13545393..13545395,+ | |||
|coexpression_cluster_id=C1985 | |coexpression_cluster_id=C1985 | ||
|description=CAGE_peak_at_chr7:13545393..13545395,+ | |description=CAGE_peak_at_chr7:13545393..13545395,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;4.89e-53;3!CL:0002251;6.42e-09;20 | |ontology_enrichment_celltype_v019=CL:0002178;4.89e-53;3!CL:0002251;6.42e-09;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.75e-53,3;CL:0002251,6.17e-09,20 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3119!9.27e-09!14 | |ontology_enrichment_disease=DOID:3119!9.27e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.87e-45;14!DOID:3493;3.44e-21;2!DOID:299;4.73e-15;25 | |ontology_enrichment_disease_v019=DOID:3119;1.87e-45;14!DOID:3493;3.44e-21;2!DOID:299;4.73e-15;25 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.76e-45,14;DOID:3493,3.81e-21,2;DOID:299,4.61e-15,25 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.62e-71;5!UBERON:0010039;3.62e-71;5!UBERON:0001041;3.92e-26;14!UBERON:0005409;2.78e-16;22!UBERON:0004921;1.74e-09;33 | |ontology_enrichment_uberon_v019=UBERON:0000945;3.62e-71;5!UBERON:0010039;3.62e-71;5!UBERON:0001041;3.92e-26;14!UBERON:0005409;2.78e-16;22!UBERON:0004921;1.74e-09;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.04e-45,8;UBERON:0010039,5.04e-45,8;UBERON:0005409,1.55e-14,25 | |||
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| ||
|short_description=p@chr7:13545393..13545395,+ | |short_description=p@chr7:13545393..13545395,+ | ||
}} | }} |
Latest revision as of 06:24, 31 July 2015
Short description: | p@chr7:13545393..13545395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:13545393..13545395, + |
Coexpression cluster: | C1985_gastric_signet_lymphangiectasia_Prostate_smallcell_Intestinal_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.75e-53 | 3 |
epithelial cell of alimentary canal | 6.17e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.04e-45 | 8 |
food storage organ | 5.04e-45 | 8 |
gastrointestinal system | 1.55e-14 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.76e-45 | 14 |
signet ring cell adenocarcinoma | 3.81e-21 | 2 |
adenocarcinoma | 4.61e-15 | 25 |