FFCP PHASE1:Hg19::chr11:2159748..2159761,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-253bp_to_BC017277_5end | |association_with_transcript=-253bp_to_BC017277_5end | ||
|cluster_id=chr11:2159748..2159761,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_12_at_BC017277_5end | |description=CAGE_peak_12_at_BC017277_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!9.30e-07!3 | |ontology_enrichment_celltype=CL:0002541!9.30e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.96e-30;19!CL:0002577;5.97e-15;3!CL:0002575;3.68e-11;2!CL:0002536;4.27e-11;2!CL:0002537;1.03e-09;5!CL:0002541;5.70e-08;3 | |ontology_enrichment_celltype_v019=CL:0000349;9.96e-30;19!CL:0002577;5.97e-15;3!CL:0002575;3.68e-11;2!CL:0002536;4.27e-11;2!CL:0002537;1.03e-09;5!CL:0002541;5.70e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.35e-30,19;CL:0002577,3.19e-15,3;CL:0002575,3.68e-11,2;CL:0002536,4.49e-11,2;CL:0002537,1.06e-09,5;CL:0002541,5.71e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.80e-11;11!UBERON:0009497;3.99e-09;13 | |ontology_enrichment_development_v019=UBERON:0004161;7.80e-11;11!UBERON:0009497;3.99e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.50e-18!14;UBERON:0000158!1.50e-18!14;UBERON:0003124!1.73e-13!7;UBERON:0000478!3.17e-13!24;UBERON:0005284!1.41e-08!5;UBERON:0001987!2.19e-08!4;UBERON:0004340!2.19e-08!4;UBERON:0004923!2.22e-07!57;UBERON:0000305!2.96e-07!7;UBERON:0000476!9.30e-07!3;UBERON:0000920!9.30e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!1.50e-18!14;UBERON:0000158!1.50e-18!14;UBERON:0003124!1.73e-13!7;UBERON:0000478!3.17e-13!24;UBERON:0005284!1.41e-08!5;UBERON:0001987!2.19e-08!4;UBERON:0004340!2.19e-08!4;UBERON:0004923!2.22e-07!57;UBERON:0000305!2.96e-07!7;UBERON:0000476!9.30e-07!3;UBERON:0000920!9.30e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.85e-32;24!UBERON:0005631;3.20e-24;10!UBERON:0000158;3.20e-24;10!UBERON:0001987;2.09e-19;4!UBERON:0000305;6.02e-18;7!UBERON:0003124;5.70e-08;3!UBERON:0000920;5.70e-08;3!UBERON:0000922;5.18e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.85e-32;24!UBERON:0005631;3.20e-24;10!UBERON:0000158;3.20e-24;10!UBERON:0001987;2.09e-19;4!UBERON:0000305;6.02e-18;7!UBERON:0003124;5.70e-08;3!UBERON:0000920;5.70e-08;3!UBERON:0000922;5.18e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.09e-41,14;UBERON:0000158,4.09e-41,14;UBERON:0000478,1.40e-32,24;UBERON:0003124,3.63e-25,7;UBERON:0001987,1.12e-19,4;UBERON:0004340,1.12e-19,4;UBERON:0000305,6.46e-18,7;UBERON:0004871,1.21e-15,8;UBERON:0004923,7.21e-10,66;UBERON:0000920,5.71e-08,3 | |||
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| ||
|short_description=p12@BC017277 | |short_description=p12@BC017277 | ||
}} | }} |
Latest revision as of 21:02, 23 July 2015
Short description: | p12@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -253bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.35e-30 | 19 |
placental epithelial cell | 3.19e-15 | 3 |
central nervous system pericyte | 3.68e-11 | 2 |
amniotic epithelial cell | 4.49e-11 | 2 |
amnion mesenchymal stem cell | 1.06e-09 | 5 |
chorionic membrane mesenchymal stem cell | 5.71e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.09e-41 | 14 |
membranous layer | 4.09e-41 | 14 |
extraembryonic structure | 1.40e-32 | 24 |
chorion | 3.63e-25 | 7 |
placenta | 1.12e-19 | 4 |
allantois | 1.12e-19 | 4 |
amnion | 6.46e-18 | 7 |
somatic layer of lateral plate mesoderm | 1.21e-15 | 8 |
organ component layer | 7.21e-10 | 66 |
egg chorion | 5.71e-08 | 3 |