FFCP PHASE1:Hg19::chr20:49047228..49047236,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:49047228..49047236,- | |||
|description=CAGE_peak_at_chr20:49047228..49047236,- | |description=CAGE_peak_at_chr20:49047228..49047236,- | ||
|id=chr20:49047228..49047236,- | |id=chr20:49047228..49047236,- | ||
|ontology_enrichment_celltype=CL:0002328!9.16e-24!3;CL:0002076!1.13e-22!43;CL:0002368!2.16e-20!13;CL:0000223!8.40e-19!59;CL:0002327!4.22e-18!4;CL:0000622!2.92e-14!5;CL:0002202!1.05e-13!9;CL:0002632!1.05e-13!9;CL:0000154!5.67e-12!6;CL:0000066!1.85e-11!254;CL:0002623!4.43e-11!3;CL:0002231!1.39e-10!3;CL:0000362!7.07e-09!8;CL:0000150!3.84e-08!9;CL:0000220!3.69e-07!246;CL:0002321!4.49e-07!248;CL:0000312!9.73e-07!5 | |ontology_enrichment_celltype=CL:0002328!9.16e-24!3;CL:0002076!1.13e-22!43;CL:0002368!2.16e-20!13;CL:0000223!8.40e-19!59;CL:0002327!4.22e-18!4;CL:0000622!2.92e-14!5;CL:0002202!1.05e-13!9;CL:0002632!1.05e-13!9;CL:0000154!5.67e-12!6;CL:0000066!1.85e-11!254;CL:0002623!4.43e-11!3;CL:0002231!1.39e-10!3;CL:0000362!7.07e-09!8;CL:0000150!3.84e-08!9;CL:0000220!3.69e-07!246;CL:0002321!4.49e-07!248;CL:0000312!9.73e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002327;3.35e-66;4 | |ontology_enrichment_celltype_v019=CL:0002327;3.35e-66;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,4.67e-66,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3151!3.06e-09!1;DOID:3149!3.06e-09!1 | |ontology_enrichment_disease=DOID:3151!3.06e-09!1;DOID:3149!3.06e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.39e-66;1!DOID:3149;2.39e-66;1!DOID:3451;5.04e-34;2!DOID:4159;5.04e-34;2!DOID:0060122;5.04e-34;2 | |ontology_enrichment_disease_v019=DOID:3151;2.39e-66;1!DOID:3149;2.39e-66;1!DOID:3451;5.04e-34;2!DOID:4159;5.04e-34;2!DOID:0060122;5.04e-34;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.23e-66,1;DOID:3149,1.23e-66,1;DOID:3451,3.61e-34,2;DOID:4159,3.61e-34,2;DOID:0060122,3.61e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0004815!9.16e-24!3;UBERON:0002031!9.16e-24!3;UBERON:0001911!4.22e-18!4;UBERON:0005333!4.22e-18!4;UBERON:0008425!4.22e-18!4;UBERON:0005311!4.22e-18!4;UBERON:0002185!5.61e-18!4;UBERON:0005153!4.85e-12!37;UBERON:0001004!1.28e-10!72;UBERON:0000161!1.72e-09!35;UBERON:0000076!2.62e-09!8;UBERON:0007196!7.31e-09!14;UBERON:0001558!7.31e-09!14;UBERON:0000166!1.17e-08!21;UBERON:0005157!1.98e-08!51;UBERON:0002365!2.04e-08!31;UBERON:0002330!2.04e-08!31;UBERON:0000485!2.86e-08!9;UBERON:0004119!4.24e-08!169;UBERON:0000925!4.24e-08!169;UBERON:0006595!4.24e-08!169;UBERON:0003102!1.64e-07!95;UBERON:0002530!4.34e-07!59 | |ontology_enrichment_uberon=UBERON:0004815!9.16e-24!3;UBERON:0002031!9.16e-24!3;UBERON:0001911!4.22e-18!4;UBERON:0005333!4.22e-18!4;UBERON:0008425!4.22e-18!4;UBERON:0005311!4.22e-18!4;UBERON:0002185!5.61e-18!4;UBERON:0005153!4.85e-12!37;UBERON:0001004!1.28e-10!72;UBERON:0000161!1.72e-09!35;UBERON:0000076!2.62e-09!8;UBERON:0007196!7.31e-09!14;UBERON:0001558!7.31e-09!14;UBERON:0000166!1.17e-08!21;UBERON:0005157!1.98e-08!51;UBERON:0002365!2.04e-08!31;UBERON:0002330!2.04e-08!31;UBERON:0000485!2.86e-08!9;UBERON:0004119!4.24e-08!169;UBERON:0000925!4.24e-08!169;UBERON:0006595!4.24e-08!169;UBERON:0003102!1.64e-07!95;UBERON:0002530!4.34e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;3.35e-66;4!UBERON:0000014;8.69e-18;4!UBERON:0002365;2.79e-09;31!UBERON:0002330;2.79e-09;31 | |ontology_enrichment_uberon_v019=UBERON:0001911;3.35e-66;4!UBERON:0000014;8.69e-18;4!UBERON:0002365;2.79e-09;31!UBERON:0002330;2.79e-09;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,4.67e-66,4;UBERON:0005333,4.67e-66,4;UBERON:0008425,4.67e-66,4;UBERON:0005311,4.67e-66,4;UBERON:0000076,9.08e-34,8;UBERON:0000014,7.35e-18,4;UBERON:0002365,1.25e-09,31;UBERON:0005085,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0005153,3.03e-08,37;UBERON:0003100,1.52e-07,41 | |||
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|short_description=p@chr20:49047228..49047236,- | |short_description=p@chr20:49047228..49047236,- | ||
}} | }} |
Latest revision as of 15:13, 28 July 2015
Short description: | p@chr20:49047228..49047236, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:49047228..49047236, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 4.67e-66 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 4.67e-66 | 4 |
mammary bud | 4.67e-66 | 4 |
mammary ridge | 4.67e-66 | 4 |
mammary placode | 4.67e-66 | 4 |
external ectoderm | 9.08e-34 | 8 |
zone of skin | 7.35e-18 | 4 |
exocrine gland | 1.25e-09 | 31 |
ectodermal placode | 1.25e-09 | 31 |
exocrine system | 1.25e-09 | 31 |
epithelial bud | 3.03e-08 | 37 |
female organism | 1.52e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.23e-66 | 1 |
keratoacanthoma | 1.23e-66 | 1 |
skin carcinoma | 3.61e-34 | 2 |
skin cancer | 3.61e-34 | 2 |
integumentary system cancer | 3.61e-34 | 2 |