FFCP PHASE1:Hg19::chr9:137681968..137681982,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137681968..137681982,+ | |||
|coexpression_cluster_id=C1097 | |coexpression_cluster_id=C1097 | ||
|description=CAGE_peak_at_chr9:137681968..137681982,+ | |description=CAGE_peak_at_chr9:137681968..137681982,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!6.29e-10!75;CL:0002620!3.03e-09!23;CL:0002334!6.36e-08!12;CL:0000055!6.02e-07!180 | |ontology_enrichment_celltype=CL:0000057!6.29e-10!75;CL:0002620!3.03e-09!23;CL:0002334!6.36e-08!12;CL:0000055!6.02e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.26e-13;23!CL:0000197;8.64e-08;6!CL:0000098;8.64e-08;6!CL:0002167;8.64e-08;6 | |ontology_enrichment_celltype_v019=CL:0002620;4.26e-13;23!CL:0000197;8.64e-08;6!CL:0000098;8.64e-08;6!CL:0002167;8.64e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.69e-13,23;CL:0000197,6.13e-08,6;CL:0000098,6.13e-08,6;CL:0002167,6.13e-08,6;CL:0000057,3.44e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.34e-10;5!DOID:450;8.34e-10;5!DOID:66;8.34e-10;5!DOID:423;8.34e-10;5!DOID:0080000;8.34e-10;5!DOID:11722;8.34e-10;5!DOID:2394;1.98e-08;14 | |ontology_enrichment_disease_v019=DOID:17;8.34e-10;5!DOID:450;8.34e-10;5!DOID:66;8.34e-10;5!DOID:423;8.34e-10;5!DOID:0080000;8.34e-10;5!DOID:11722;8.34e-10;5!DOID:2394;1.98e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:17,6.12e-10,5;DOID:450,6.12e-10,5;DOID:66,6.12e-10,5;DOID:423,6.12e-10,5;DOID:0080000,6.12e-10,5;DOID:11722,6.12e-10,5;DOID:2394,1.44e-08,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.17e-11;2!UBERON:0002757;4.17e-11;2!UBERON:0010134;4.17e-11;2!UBERON:0005408;4.17e-11;2!UBERON:0001899;4.17e-11;2 | |ontology_enrichment_uberon_v019=UBERON:0001905;4.17e-11;2!UBERON:0002757;4.17e-11;2!UBERON:0010134;4.17e-11;2!UBERON:0005408;4.17e-11;2!UBERON:0001899;4.17e-11;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.73e-11,2;UBERON:0002757,2.73e-11,2;UBERON:0010134,2.73e-11,2;UBERON:0005408,2.73e-11,2;UBERON:0001899,2.73e-11,2;UBERON:0002097,8.08e-07,41 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,1.31752178539689,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,1.05927344650575,3.44203944898576,0,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,5.202299434977,1.70845911054854,0.423863802319124,2.10063767259082,0.206105058476878,4.63752972082133,0.930584281657949,2.53164498361899,0.487185025805993,5.04867548488229,0.184099797284599,1.2931684545505,2.13005755509969,0.403008392910561,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.723033089650446,0.55146986366197,0.653638332277218,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0,0.823240336780769,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,1.42743191037729,0.788512075169673,1.40569697991256,0,0,0,1.32845119707087,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,2.60885354589706,0.841980283299221,0.896974044789907,0.511707249066704,1.28683136914886,0,0.771048469013278,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.524497659837696,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01452822600355,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0.537101224341368,0.725083469571143,0,0.445160178233687,0,0,1.02090169995667,0,0,4.09256050879832,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,1.27264888758341,0,0,0,0,0,0,0,0,0,1.00387946542836,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0,0,0.211125408127993,0.796991953004279,0,0,0.306806047506464,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0,0,0.139423744278603,0.846452843541768,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0.52418000472609,0.343972064943233,0,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0.951329442515298,0.418411385249333,0.101998217636322,0.866851769704557,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0.399358000997982,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0.326587360109409,0,0,1.70388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.372578417648301,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0.701139929541673,0,0,0.251567901752575,1.77962244319307,0,0.453692771289717,0.310874401165561,0.443565449968902,0,0.449803112163605,0.155262956876259,0.829412415681711,1.06336685823198,1.5652351854352,0.150257608997218,1.52322084867518,0,0.181848659202559,0.214821114084977,1.39210127963548,1.99047944349308,0,1.03018711554838,1.01024846629776,0,0.192619830407303,0.214441591374926,0.521988583930423,0.453411851024545,0,0.734210113519403,0.71635536432595,0,0.438568099157414,0.353378291891762,0.192914038270915,0.506827321959218,0,0,0.911579868532147,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.109209638192014,0,1.2754495206101,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0.397832444232549,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,3.21421101526972,1.68141861109412,0,0.227662191351298,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,3.63431306985271,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,1.27016115057279,0,0,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0.655678681511872,0,0.980593287015622,0,0.196308467114945,0,0.4226557275834,0,0,0.257831551894309,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0.5290268405154,0.743990036333503,0,0.432626562123789,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0.426467963801962,0.476128862927481,0,0,0.33639558774184,0.0636471582781649,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,1.58913877437726,0.813792356631477,0,0,0 | |phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,1.31752178539689,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,1.05927344650575,3.44203944898576,0,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,5.202299434977,1.70845911054854,0.423863802319124,2.10063767259082,0.206105058476878,4.63752972082133,0.930584281657949,2.53164498361899,0.487185025805993,5.04867548488229,0.184099797284599,1.2931684545505,2.13005755509969,0.403008392910561,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.723033089650446,0.55146986366197,0.653638332277218,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0,0.823240336780769,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,1.42743191037729,0.788512075169673,1.40569697991256,0,0,0,1.32845119707087,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,2.60885354589706,0.841980283299221,0.896974044789907,0.511707249066704,1.28683136914886,0,0.771048469013278,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.524497659837696,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01452822600355,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0.537101224341368,0.725083469571143,0,0.445160178233687,0,0,1.02090169995667,0,0,4.09256050879832,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,1.27264888758341,0,0,0,0,0,0,0,0,0,1.00387946542836,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0,0,0.211125408127993,0.796991953004279,0,0,0.306806047506464,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0,0,0.139423744278603,0.846452843541768,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0.52418000472609,0.343972064943233,0,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0.951329442515298,0.418411385249333,0.101998217636322,0.866851769704557,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0.399358000997982,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0.326587360109409,0,0,1.70388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.372578417648301,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0.701139929541673,0,0,0.251567901752575,1.77962244319307,0,0.453692771289717,0.310874401165561,0.443565449968902,0,0.449803112163605,0.155262956876259,0.829412415681711,1.06336685823198,1.5652351854352,0.150257608997218,1.52322084867518,0,0.181848659202559,0.214821114084977,1.39210127963548,1.99047944349308,0,1.03018711554838,1.01024846629776,0,0.192619830407303,0.214441591374926,0.521988583930423,0.453411851024545,0,0.734210113519403,0.71635536432595,0,0.438568099157414,0.353378291891762,0.192914038270915,0.506827321959218,0,0,0.911579868532147,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.109209638192014,0,1.2754495206101,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0.397832444232549,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,3.21421101526972,1.68141861109412,0,0.227662191351298,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,3.63431306985271,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,1.27016115057279,0,0,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0.655678681511872,0,0.980593287015622,0,0.196308467114945,0,0.4226557275834,0,0,0.257831551894309,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0.5290268405154,0.743990036333503,0,0.432626562123789,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0.426467963801962,0.476128862927481,0,0,0.33639558774184,0.0636471582781649,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,1.58913877437726,0.813792356631477,0,0,0 | ||
|short_description=p@chr9:137681968..137681982,+ | |short_description=p@chr9:137681968..137681982,+ | ||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137681968..137681982, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137681968..137681982, + |
Coexpression cluster: | C1097_Fibroblast_Preadipocyte_Smooth_Olfactory_mesenchymal_mesothelioma_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.69e-13 | 23 |
receptor cell | 6.13e-08 | 6 |
sensory epithelial cell | 6.13e-08 | 6 |
olfactory epithelial cell | 6.13e-08 | 6 |
fibroblast | 3.44e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.73e-11 | 2 |
regional part of epithalamus | 2.73e-11 | 2 |
secretory circumventricular organ | 2.73e-11 | 2 |
circumventricular organ | 2.73e-11 | 2 |
epithalamus | 2.73e-11 | 2 |
skin of body | 8.08e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.12e-10 | 5 |
myotonic disease | 6.12e-10 | 5 |
muscle tissue disease | 6.12e-10 | 5 |
myopathy | 6.12e-10 | 5 |
muscular disease | 6.12e-10 | 5 |
myotonic dystrophy | 6.12e-10 | 5 |
ovarian cancer | 1.44e-08 | 14 |