FFCP PHASE1:Hg19::chr11:32154200..32154208,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000525133_5end | |association_with_transcript=-36bp_to_ENST00000525133_5end | ||
|cluster_id=chr11:32154200..32154208,+ | |||
|coexpression_cluster_id=C359 | |coexpression_cluster_id=C359 | ||
|description=CAGE_peak_1_at_ENST00000525133_5end | |description=CAGE_peak_1_at_ENST00000525133_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!8.79e-15!24;CL:0000826!8.79e-15!24;CL:0000946!1.65e-07!1;CL:0000786!1.65e-07!1;CL:0000980!1.65e-07!1 | |ontology_enrichment_celltype=CL:0000945!8.79e-15!24;CL:0000826!8.79e-15!24;CL:0000946!1.65e-07!1;CL:0000786!1.65e-07!1;CL:0000980!1.65e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.61e-34;1!CL:0000786;3.61e-34;1!CL:0000945;3.63e-13;24 | |ontology_enrichment_celltype_v019=CL:0000946;3.61e-34;1!CL:0000786;3.61e-34;1!CL:0000945;3.63e-13;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.61e-34,1;CL:0000786,3.61e-34,1;CL:0000980,3.61e-34,1;CL:0000785,7.67e-18,2;CL:0000955,7.67e-18,2;CL:0000818,7.67e-18,2;CL:0000954,7.67e-18,2;CL:0000816,7.67e-18,2;CL:0000945,3.48e-13,24;CL:0000826,3.48e-13,24;CL:0000817,2.31e-12,3 | |||
|ontology_enrichment_development_v019=CL:0000954;7.67e-18;2 | |ontology_enrichment_development_v019=CL:0000954;7.67e-18;2 | ||
|ontology_enrichment_disease=DOID:630!1.46e-07!1;DOID:0050177!1.46e-07!1;DOID:0050427!1.46e-07!1;DOID:2355!3.20e-07!1 | |ontology_enrichment_disease=DOID:630!1.46e-07!1;DOID:0050177!1.46e-07!1;DOID:0050427!1.46e-07!1;DOID:2355!3.20e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:630;1.84e-34;1!DOID:0050177;1.84e-34;1!DOID:0050427;1.84e-34;1!DOID:1909;1.07e-17;2!DOID:0060058;3.25e-14;10 | |ontology_enrichment_disease_v019=DOID:630;1.84e-34;1!DOID:0050177;1.84e-34;1!DOID:0050427;1.84e-34;1!DOID:1909;1.07e-17;2!DOID:0060058;3.25e-14;10 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.84e-34,1;DOID:0050177,1.84e-34,1;DOID:0050427,1.84e-34,1;DOID:1909,1.07e-17,2;DOID:0060058,3.04e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.51e-08!7 | |ontology_enrichment_uberon=UBERON:0004177!6.51e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.07e-12;3!UBERON:0004177;5.73e-08;5!UBERON:0005057;5.73e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;2.07e-12;3!UBERON:0004177;5.73e-08;5!UBERON:0005057;5.73e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3 | |||
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|short_description=p1@ENST00000525133 | |short_description=p1@ENST00000525133 | ||
}} | }} |
Latest revision as of 21:33, 23 July 2015
Short description: | p1@ENST00000525133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000525133_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | -36bp_to_ENST00000525133_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.61e-34 | 1 |
plasma cell | 3.61e-34 | 1 |
plasmablast | 3.61e-34 | 1 |
mature B cell | 7.67e-18 | 2 |
pre-B-II cell | 7.67e-18 | 2 |
transitional stage B cell | 7.67e-18 | 2 |
small pre-B-II cell | 7.67e-18 | 2 |
immature B cell | 7.67e-18 | 2 |
lymphocyte of B lineage | 3.48e-13 | 24 |
pro-B cell | 3.48e-13 | 24 |
precursor B cell | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.84e-34 | 1 |
monogenic disease | 1.84e-34 | 1 |
xeroderma pigmentosum | 1.84e-34 | 1 |
melanoma | 1.07e-17 | 2 |
lymphoma | 3.04e-14 | 10 |