FFCP PHASE1:Hg19::chr8:70541832..70541846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:70541832..70541846,+ | |||
|coexpression_cluster_id=C637 | |coexpression_cluster_id=C637 | ||
|description=CAGE_peak_at_chr8:70541832..70541846,+ | |description=CAGE_peak_at_chr8:70541832..70541846,+ | ||
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|ontology_enrichment_celltype=CL:0000055!1.08e-19!180;CL:0000057!7.41e-18!75;CL:0002620!1.22e-09!23;CL:0002334!7.79e-09!12;CL:0000680!2.48e-07!57;CL:0000056!2.48e-07!57;CL:0000355!2.48e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.08e-19!180;CL:0000057!7.41e-18!75;CL:0002620!1.22e-09!23;CL:0002334!7.79e-09!12;CL:0000680!2.48e-07!57;CL:0000056!2.48e-07!57;CL:0000355!2.48e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002334;9.85e-12;12!CL:0002579;2.66e-10;3!CL:0002580;9.49e-10;3!CL:0000197;4.16e-09;6!CL:0000098;4.16e-09;6!CL:0002167;4.16e-09;6!CL:0000499;1.53e-07;28!CL:0002620;4.96e-07;23 | |ontology_enrichment_celltype_v019=CL:0002334;9.85e-12;12!CL:0002579;2.66e-10;3!CL:0002580;9.49e-10;3!CL:0000197;4.16e-09;6!CL:0000098;4.16e-09;6!CL:0002167;4.16e-09;6!CL:0000499;1.53e-07;28!CL:0002620;4.96e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.70e-12,76;CL:0002334,9.09e-12,12;CL:0002579,3.08e-10,3;CL:0002580,7.34e-10,3;CL:0000197,4.54e-09,6;CL:0000098,4.54e-09,6;CL:0002167,4.54e-09,6;CL:0000499,1.25e-07,28;CL:0002620,4.47e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.15e-07;14!DOID:3350;3.38e-07;2 | |ontology_enrichment_disease_v019=DOID:2394;2.15e-07;14!DOID:3350;3.38e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.01e-07,14;DOID:3350,2.29e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002385!5.90e-08!63;UBERON:0001015!5.90e-08!63;UBERON:0000383!5.90e-08!63;UBERON:0001134!3.40e-07!61;UBERON:0002036!3.40e-07!61;UBERON:0003082!3.40e-07!61;UBERON:0004872!6.59e-07!84 | |ontology_enrichment_uberon=UBERON:0002385!5.90e-08!63;UBERON:0001015!5.90e-08!63;UBERON:0000383!5.90e-08!63;UBERON:0001134!3.40e-07!61;UBERON:0002036!3.40e-07!61;UBERON:0003082!3.40e-07!61;UBERON:0004872!6.59e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.41e-09;6!UBERON:0002358;7.41e-09;6!UBERON:0003684;7.41e-09;6!UBERON:0001178;7.41e-09;6!UBERON:0004457;1.27e-08;9!UBERON:0000042;1.27e-08;9!UBERON:0005406;2.39e-07;2!UBERON:0001443;8.39e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0003688;7.41e-09;6!UBERON:0002358;7.41e-09;6!UBERON:0003684;7.41e-09;6!UBERON:0001178;7.41e-09;6!UBERON:0004457;1.27e-08;9!UBERON:0000042;1.27e-08;9!UBERON:0005406;2.39e-07;2!UBERON:0001443;8.39e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.12e-09,6;UBERON:0002358,9.12e-09,6;UBERON:0003684,9.12e-09,6;UBERON:0001178,9.12e-09,6;UBERON:0005406,2.29e-07,2;UBERON:0001443,7.53e-07,11 | |||
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|short_description=p@chr8:70541832..70541846,+ | |short_description=p@chr8:70541832..70541846,+ | ||
}} | }} |
Latest revision as of 19:41, 31 July 2015
Short description: | p@chr8:70541832..70541846, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:70541832..70541846, + |
Coexpression cluster: | C637_osteoclastoma_Fibroblast_Preadipocyte_Chondrocyte_spindle_hepatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.70e-12 | 76 |
preadipocyte | 9.09e-12 | 12 |
omentum preadipocyte | 3.08e-10 | 3 |
preadipocyte of the breast | 7.34e-10 | 3 |
receptor cell | 4.54e-09 | 6 |
sensory epithelial cell | 4.54e-09 | 6 |
olfactory epithelial cell | 4.54e-09 | 6 |
stromal cell | 1.25e-07 | 28 |
skin fibroblast | 4.47e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.12e-09 | 6 |
peritoneum | 9.12e-09 | 6 |
abdominal cavity | 9.12e-09 | 6 |
visceral peritoneum | 9.12e-09 | 6 |
perirenal fat | 2.29e-07 | 2 |
chest | 7.53e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.01e-07 | 14 |
mesenchymal cell neoplasm | 2.29e-07 | 2 |