FFCP PHASE1:Hg19::chr3:100567665..100567691,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:100567665..100567691,- | |||
|coexpression_cluster_id=C404 | |coexpression_cluster_id=C404 | ||
|description=CAGE_peak_at_chr3:100567665..100567691,- | |description=CAGE_peak_at_chr3:100567665..100567691,- | ||
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|ontology_enrichment_celltype=CL:0000057!5.31e-10!75;CL:0002620!1.00e-09!23;CL:0000055!1.59e-07!180 | |ontology_enrichment_celltype=CL:0000057!5.31e-10!75;CL:0002620!1.00e-09!23;CL:0000055!1.59e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000569;9.18e-10;4!CL:0000134;2.32e-08;55!CL:0002623;1.36e-07;3!CL:0000723;1.72e-07;61!CL:0000048;3.15e-07;58!CL:0000515;5.39e-07;3!CL:0000153;8.61e-07;9!CL:0000447;8.61e-07;9 | |ontology_enrichment_celltype_v019=CL:0000569;9.18e-10;4!CL:0000134;2.32e-08;55!CL:0002623;1.36e-07;3!CL:0000723;1.72e-07;61!CL:0000048;3.15e-07;58!CL:0000515;5.39e-07;3!CL:0000153;8.61e-07;9!CL:0000447;8.61e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000569,5.82e-10,4;CL:0000011,5.82e-10,4;CL:0002623,1.30e-07,3;CL:0000153,9.22e-07,9;CL:0000447,9.22e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000011;9.18e-10;4 | |ontology_enrichment_development_v019=CL:0000011;9.18e-10;4 | ||
|ontology_enrichment_disease=DOID:2394!2.39e-09!14 | |ontology_enrichment_disease=DOID:2394!2.39e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;1.14e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.47e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.52e-07!95 | |ontology_enrichment_uberon=UBERON:0003102!5.52e-07!95 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.54e-07,24;UBERON:0005498,2.54e-07,24;UBERON:0004140,2.54e-07,24;UBERON:0009881,2.54e-07,24;UBERON:0004141,2.54e-07,24;UBERON:0003084,2.54e-07,24;UBERON:0007005,2.54e-07,24;UBERON:0004139,2.54e-07,24;UBERON:0004291,2.54e-07,24 | |||
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| ||
|short_description=p@chr3:100567665..100567691,- | |short_description=p@chr3:100567665..100567691,- | ||
}} | }} |
Latest revision as of 13:40, 29 July 2015
Short description: | p@chr3:100567665..100567691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100567665..100567691, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 5.82e-10 | 4 |
migratory trunk neural crest cell | 5.82e-10 | 4 |
acinar cell of salivary gland | 1.30e-07 | 3 |
GAG secreting cell | 9.22e-07 | 9 |
carbohydrate secreting cell | 9.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
heart | 2.54e-07 | 24 |
primitive heart tube | 2.54e-07 | 24 |
primary heart field | 2.54e-07 | 24 |
anterior lateral plate mesoderm | 2.54e-07 | 24 |
heart tube | 2.54e-07 | 24 |
heart primordium | 2.54e-07 | 24 |
cardiac mesoderm | 2.54e-07 | 24 |
cardiogenic plate | 2.54e-07 | 24 |
heart rudiment | 2.54e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.47e-10 | 14 |