FFCP PHASE1:Hg19::chr5:35047976..35047990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64902 | |EntrezGene=64902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14412 | |HGNC=14412 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000505542_5end | |association_with_transcript=4bp_to_ENST00000505542_5end | ||
|cluster_id=chr5:35047976..35047990,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_AGXT2_5end | |description=CAGE_peak_2_at_AGXT2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!3.87e-09!12;CL:0000417!3.87e-09!12;CL:0000668!3.87e-09!12;CL:0000414!3.87e-09!12;CL:0000412!3.87e-09!12;CL:0000182!3.87e-09!12 | |ontology_enrichment_celltype=CL:0000181!3.87e-09!12;CL:0000417!3.87e-09!12;CL:0000668!3.87e-09!12;CL:0000414!3.87e-09!12;CL:0000412!3.87e-09!12;CL:0000182!3.87e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.11e-15;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.11e-15;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.27e-11;31!UBERON:0003918;6.04e-09;10!UBERON:0007687;6.04e-09;10!UBERON:0004161;4.18e-08;11!UBERON:0009497;5.42e-07;13 | |ontology_enrichment_development_v019=UBERON:0003104;6.27e-11;31!UBERON:0003918;6.04e-09;10!UBERON:0007687;6.04e-09;10!UBERON:0004161;4.18e-08;11!UBERON:0009497;5.42e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.31e-15!55;UBERON:0005173!2.31e-15!55;UBERON:0002107!8.45e-15!19;UBERON:0006925!8.45e-15!19;UBERON:0008836!8.45e-15!19;UBERON:0002417!9.62e-14!61;UBERON:0000916!9.62e-14!61;UBERON:0008835!9.00e-13!22;UBERON:0003894!9.00e-13!22;UBERON:0009854!3.26e-12!23;UBERON:0001301!3.45e-12!1;UBERON:0007499!3.14e-11!25;UBERON:0009497!3.14e-11!25;UBERON:0000015!3.14e-11!25;UBERON:0002423!3.14e-11!25;UBERON:0006235!3.14e-11!25;UBERON:0004161!3.14e-11!25;UBERON:0005057!8.57e-11!26;UBERON:0009856!8.57e-11!26;UBERON:0002365!4.93e-09!31;UBERON:0002330!4.93e-09!31;UBERON:0002368!5.51e-08!35;UBERON:0005177!2.42e-07!107;UBERON:0002108!4.16e-07!14;UBERON:0003929!4.30e-07!54;UBERON:0009569!6.86e-07!113;UBERON:0002113!8.45e-07!27;UBERON:0003918!8.45e-07!27;UBERON:0005095!8.45e-07!27;UBERON:0007687!8.45e-07!27 | |ontology_enrichment_uberon=UBERON:0005172!2.31e-15!55;UBERON:0005173!2.31e-15!55;UBERON:0002107!8.45e-15!19;UBERON:0006925!8.45e-15!19;UBERON:0008836!8.45e-15!19;UBERON:0002417!9.62e-14!61;UBERON:0000916!9.62e-14!61;UBERON:0008835!9.00e-13!22;UBERON:0003894!9.00e-13!22;UBERON:0009854!3.26e-12!23;UBERON:0001301!3.45e-12!1;UBERON:0007499!3.14e-11!25;UBERON:0009497!3.14e-11!25;UBERON:0000015!3.14e-11!25;UBERON:0002423!3.14e-11!25;UBERON:0006235!3.14e-11!25;UBERON:0004161!3.14e-11!25;UBERON:0005057!8.57e-11!26;UBERON:0009856!8.57e-11!26;UBERON:0002365!4.93e-09!31;UBERON:0002330!4.93e-09!31;UBERON:0002368!5.51e-08!35;UBERON:0005177!2.42e-07!107;UBERON:0002108!4.16e-07!14;UBERON:0003929!4.30e-07!54;UBERON:0009569!6.86e-07!113;UBERON:0002113!8.45e-07!27;UBERON:0003918!8.45e-07!27;UBERON:0005095!8.45e-07!27;UBERON:0007687!8.45e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.36e-26;19!UBERON:0006925;3.36e-26;19!UBERON:0002423;5.61e-20;25!UBERON:0002365;4.05e-16;31!UBERON:0002330;4.05e-16;31!UBERON:0002368;5.70e-14;33!UBERON:0005172;1.53e-13;52!UBERON:0005173;1.53e-13;52!UBERON:0000949;3.42e-10;43!UBERON:0002417;2.86e-09;58!UBERON:0000916;2.86e-09;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.36e-26;19!UBERON:0006925;3.36e-26;19!UBERON:0002423;5.61e-20;25!UBERON:0002365;4.05e-16;31!UBERON:0002330;4.05e-16;31!UBERON:0002368;5.70e-14;33!UBERON:0005172;1.53e-13;52!UBERON:0005173;1.53e-13;52!UBERON:0000949;3.42e-10;43!UBERON:0002417;2.86e-09;58!UBERON:0000916;2.86e-09;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.36e-26,19;UBERON:0006925,3.36e-26,19;UBERON:0008836,3.36e-26,19;UBERON:0008835,1.15e-22,22;UBERON:0003894,1.15e-22,22;UBERON:0009854,1.08e-21,23;UBERON:0007499,5.61e-20,25;UBERON:0009497,5.61e-20,25;UBERON:0000015,5.61e-20,25;UBERON:0002423,5.61e-20,25;UBERON:0006235,5.61e-20,25;UBERON:0004161,5.61e-20,25;UBERON:0009856,3.22e-19,26;UBERON:0005172,8.53e-18,54;UBERON:0005173,8.53e-18,54;UBERON:0002365,3.74e-16,31;UBERON:0002330,3.74e-16,31;UBERON:0002417,5.33e-16,60;UBERON:0000916,5.33e-16,60;UBERON:0002368,2.50e-14,35;UBERON:0000949,3.55e-11,45;UBERON:0005177,2.08e-09,101;UBERON:0003929,2.49e-09,54;UBERON:0002530,1.51e-08,59;UBERON:0009569,1.87e-08,112 | |||
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|short_description=p2@AGXT2 | |short_description=p2@AGXT2 | ||
}} | }} |
Latest revision as of 18:04, 17 September 2015
Short description: | p2@AGXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGXT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 4bp_to_ENST00000505542_5end |
EntrezGene: | AGXT2 |
HGNC: | 14412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.36e-26 | 19 |
digestive gland | 3.36e-26 | 19 |
liver bud | 3.36e-26 | 19 |
hepatic diverticulum | 1.15e-22 | 22 |
liver primordium | 1.15e-22 | 22 |
digestive tract diverticulum | 1.08e-21 | 23 |
epithelial sac | 5.61e-20 | 25 |
epithelium of foregut-midgut junction | 5.61e-20 | 25 |
anatomical boundary | 5.61e-20 | 25 |
hepatobiliary system | 5.61e-20 | 25 |
foregut-midgut junction | 5.61e-20 | 25 |
septum transversum | 5.61e-20 | 25 |
sac | 3.22e-19 | 26 |
abdomen element | 8.53e-18 | 54 |
abdominal segment element | 8.53e-18 | 54 |
exocrine gland | 3.74e-16 | 31 |
exocrine system | 3.74e-16 | 31 |
abdominal segment of trunk | 5.33e-16 | 60 |
abdomen | 5.33e-16 | 60 |
endocrine gland | 2.50e-14 | 35 |
endocrine system | 3.55e-11 | 45 |
trunk region element | 2.08e-09 | 101 |
gut epithelium | 2.49e-09 | 54 |
gland | 1.51e-08 | 59 |
subdivision of trunk | 1.87e-08 | 112 |