FFCP PHASE1:Hg19::chr4:25858210..25858216,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:25858210..25858216,- | |||
|description=CAGE_peak_at_chr4:25858210..25858216,- | |description=CAGE_peak_at_chr4:25858210..25858216,- | ||
|id=chr4:25858210..25858216,- | |id=chr4:25858210..25858216,- | ||
|ontology_enrichment_celltype=CL:0000945!1.09e-08!24;CL:0000826!1.09e-08!24;CL:0000236!1.52e-08!14 | |ontology_enrichment_celltype=CL:0000945!1.09e-08!24;CL:0000826!1.09e-08!24;CL:0000236!1.52e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.10e-20;13!CL:0002591;8.72e-18;1!CL:0000945;2.82e-17;24!CL:0000542;8.43e-10;53!CL:0000123;1.44e-09;2!CL:0000242;1.44e-09;2!CL:0000775;6.14e-07;3 | |ontology_enrichment_celltype_v019=CL:0000236;1.10e-20;13!CL:0002591;8.72e-18;1!CL:0000945;2.82e-17;24!CL:0000542;8.43e-10;53!CL:0000123;1.44e-09;2!CL:0000242;1.44e-09;2!CL:0000775;6.14e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.08e-19,14;CL:0002591,1.44e-17,1;CL:0000945,2.55e-17,24;CL:0000826,2.55e-17,24;CL:0000242,1.33e-09,2;CL:0000838,5.11e-08,52;CL:0000542,7.24e-08,53;CL:0000051,7.24e-08,53;CL:0000775,5.80e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;8.43e-10;53 | |ontology_enrichment_development_v019=CL:0000051;8.43e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2 | |||
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| ||
|short_description=p@chr4:25858210..25858216,- | |short_description=p@chr4:25858210..25858216,- | ||
}} | }} |
Latest revision as of 04:34, 30 July 2015
Short description: | p@chr4:25858210..25858216, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:25858210..25858216, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.08e-19 | 14 |
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
lymphocyte of B lineage | 2.55e-17 | 24 |
pro-B cell | 2.55e-17 | 24 |
Merkel cell | 1.33e-09 | 2 |
lymphoid lineage restricted progenitor cell | 5.11e-08 | 52 |
lymphocyte | 7.24e-08 | 53 |
common lymphoid progenitor | 7.24e-08 | 53 |
neutrophil | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |