FFCP PHASE1:Hg19::chr6:54172621..54172634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27283 | |EntrezGene=27283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14599 | |HGNC=14599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000486436_5end | |association_with_transcript=-22bp_to_ENST00000486436_5end | ||
|cluster_id=chr6:54172621..54172634,+ | |||
|description=CAGE_peak_3_at_TINAG_5end | |description=CAGE_peak_3_at_TINAG_5end | ||
|id=chr6:54172621..54172634,+ | |id=chr6:54172621..54172634,+ | ||
|ontology_enrichment_celltype=CL:1000497!1.29e-19!18;CL:0002518!1.29e-19!18;CL:1000507!3.42e-17!12;CL:1000494!3.42e-17!12;CL:1000449!9.36e-13!16;CL:0002681!3.86e-11!13;CL:0002584!3.86e-11!13;CL:0000239!6.40e-09!3;CL:1000615!6.40e-09!3;CL:0002306!6.40e-09!3;CL:0000313!7.29e-07!1 | |ontology_enrichment_celltype=CL:1000497!1.29e-19!18;CL:0002518!1.29e-19!18;CL:1000507!3.42e-17!12;CL:1000494!3.42e-17!12;CL:1000449!9.36e-13!16;CL:0002681!3.86e-11!13;CL:0002584!3.86e-11!13;CL:0000239!6.40e-09!3;CL:1000615!6.40e-09!3;CL:0002306!6.40e-09!3;CL:0000313!7.29e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.05e-09;10!CL:1000494;1.05e-09;10!CL:0000945;5.28e-09;24!CL:0000239;1.35e-08;3!CL:1000615;1.35e-08;3!CL:0002306;1.35e-08;3!CL:1000449;9.09e-07;15 | |ontology_enrichment_celltype_v019=CL:1000507;1.05e-09;10!CL:1000494;1.05e-09;10!CL:0000945;5.28e-09;24!CL:0000239;1.35e-08;3!CL:1000615;1.35e-08;3!CL:0002306;1.35e-08;3!CL:1000449;9.09e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.15e-09,10;CL:1000494,1.15e-09,10;CL:0000945,4.86e-09,24;CL:0000826,4.86e-09,24;CL:0000239,1.40e-08,3;CL:1000615,1.40e-08,3;CL:0002306,1.40e-08,3;CL:1000449,9.64e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4468!7.54e-13!2;DOID:299!8.96e-08!25;DOID:2152!7.29e-07!1 | |ontology_enrichment_disease=DOID:4468!7.54e-13!2;DOID:299!8.96e-08!25;DOID:2152!7.29e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;3.06e-12;2!DOID:3493;3.06e-12;2 | |ontology_enrichment_disease_v019=DOID:4468;3.06e-12;2!DOID:3493;3.06e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,2.59e-12,2;DOID:4468,2.90e-12,2 | |||
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|short_description=p3@TINAG | |short_description=p3@TINAG | ||
}} | }} |
Latest revision as of 08:14, 19 September 2015
Short description: | p3@TINAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TINAG_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000486436_5end |
EntrezGene: | TINAG |
HGNC: | 14599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.15e-09 | 10 |
nephron tubule epithelial cell | 1.15e-09 | 10 |
lymphocyte of B lineage | 4.86e-09 | 24 |
pro-B cell | 4.86e-09 | 24 |
brush border epithelial cell | 1.40e-08 | 3 |
kidney cortex tubule cell | 1.40e-08 | 3 |
epithelial cell of proximal tubule | 1.40e-08 | 3 |
epithelial cell of nephron | 9.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.15e-09 | 10 |
renal cortex tubule | 1.40e-08 | 3 |
region of nephron tubule | 1.40e-08 | 3 |
proximal tubule | 1.40e-08 | 3 |
kidney | 3.24e-08 | 26 |
kidney mesenchyme | 3.24e-08 | 26 |
upper urinary tract | 3.24e-08 | 26 |
kidney rudiment | 3.24e-08 | 26 |
kidney field | 3.24e-08 | 26 |
cavitated compound organ | 5.52e-07 | 31 |
nephron epithelium | 9.64e-07 | 15 |
renal tubule | 9.64e-07 | 15 |
nephron tubule | 9.64e-07 | 15 |
nephron | 9.64e-07 | 15 |
uriniferous tubule | 9.64e-07 | 15 |
nephrogenic mesenchyme | 9.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.59e-12 | 2 |
clear cell adenocarcinoma | 2.90e-12 | 2 |