FFCP PHASE1:Hg19::chr8:25316737..25316787,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157313 | |EntrezGene=157313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14623 | |HGNC=14623 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEI0 | |UniProt=E9PEI0 | ||
|association_with_transcript=22bp_to_ENST00000380665,ENST00000518225_5end | |association_with_transcript=22bp_to_ENST00000380665,ENST00000518225_5end | ||
|cluster_id=chr8:25316737..25316787,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_CDCA2_5end | |description=CAGE_peak_1_at_CDCA2_5end | ||
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|ontology_enrichment_celltype=CL:0000548!1.40e-16!679;CL:0000004!1.40e-16!679;CL:0000255!1.40e-16!679;CL:0000012!2.71e-16!682;CL:0000066!2.10e-13!254;CL:0002321!4.89e-10!248;CL:0000220!1.69e-09!246;CL:0000055!6.40e-09!180;CL:0000003!1.75e-08!722;CL:0000333!1.45e-07!41;CL:0000133!4.13e-07!59;CL:0002319!7.72e-07!25 | |ontology_enrichment_celltype=CL:0000548!1.40e-16!679;CL:0000004!1.40e-16!679;CL:0000255!1.40e-16!679;CL:0000012!2.71e-16!682;CL:0000066!2.10e-13!254;CL:0002321!4.89e-10!248;CL:0000220!1.69e-09!246;CL:0000055!6.40e-09!180;CL:0000003!1.75e-08!722;CL:0000333!1.45e-07!41;CL:0000133!4.13e-07!59;CL:0002319!7.72e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;5.72e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;5.72e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.99e-13,253;CL:0002321,4.60e-09,250;CL:0000333,8.69e-08,41;CL:0000133,4.67e-07,59;CL:0002319,5.73e-07,25 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.26e-48!235;DOID:14566!1.08e-47!239;DOID:0050686!5.69e-27!137;DOID:2531!5.41e-22!51;DOID:0060083!5.41e-22!51;DOID:0050687!8.37e-21!143;DOID:1240!1.08e-17!39;DOID:305!1.97e-15!106;DOID:8692!1.06e-13!31 | |ontology_enrichment_disease=DOID:162!1.26e-48!235;DOID:14566!1.08e-47!239;DOID:0050686!5.69e-27!137;DOID:2531!5.41e-22!51;DOID:0060083!5.41e-22!51;DOID:0050687!8.37e-21!143;DOID:1240!1.08e-17!39;DOID:305!1.97e-15!106;DOID:8692!1.06e-13!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;7.04e-14;39!DOID:2531;1.16e-13;51!DOID:0060083;1.16e-13;51!DOID:8692;1.60e-13;31 | |ontology_enrichment_disease_v019=DOID:1240;7.04e-14;39!DOID:2531;1.16e-13;51!DOID:0060083;1.16e-13;51!DOID:8692;1.60e-13;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,9.91e-48,235;DOID:14566,1.46e-46,239;DOID:0050686,3.63e-26,137;DOID:2531,1.72e-22,51;DOID:0060083,1.72e-22,51;DOID:0050687,2.64e-20,143;DOID:1240,4.37e-18,39;DOID:305,2.65e-15,106;DOID:8692,5.38e-14,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CDCA2 | |short_description=p1@CDCA2 | ||
}} | }} |
Latest revision as of 16:40, 17 September 2015
Short description: | p1@CDCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDCA2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 22bp_to_ENST00000380665, ENST00000518225_5end |
EntrezGene: | CDCA2 |
HGNC: | 14623 |
UniProt: | E9PEI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.99e-13 | 253 |
embryonic cell | 4.60e-09 | 250 |
migratory neural crest cell | 8.69e-08 | 41 |
neurectodermal cell | 4.67e-07 | 59 |
neural cell | 5.73e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.91e-48 | 235 |
disease of cellular proliferation | 1.46e-46 | 239 |
organ system cancer | 3.63e-26 | 137 |
hematologic cancer | 1.72e-22 | 51 |
immune system cancer | 1.72e-22 | 51 |
cell type cancer | 2.64e-20 | 143 |
leukemia | 4.37e-18 | 39 |
carcinoma | 2.65e-15 | 106 |
myeloid leukemia | 5.38e-14 | 31 |