FFCP PHASE1:Hg19::chrX:44085038..44085051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80258 | |EntrezGene=80258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26233 | |HGNC=26233 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000343571_5end | |association_with_transcript=-36bp_to_ENST00000343571_5end | ||
|cluster_id=chrX:44085038..44085051,- | |||
|coexpression_cluster_id=C347 | |coexpression_cluster_id=C347 | ||
|description=CAGE_peak_5_at_EFHC2_5end | |description=CAGE_peak_5_at_EFHC2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.21e-15;2!CL:0000242;2.21e-15;2!CL:0000312;6.21e-07;5 | |ontology_enrichment_celltype_v019=CL:0000123;2.21e-15;2!CL:0000242;2.21e-15;2!CL:0000312;6.21e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.37e-15,2;CL:0000312,6.39e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.73e-29;1!UBERON:0006242;2.73e-29;1 | |ontology_enrichment_development_v019=UBERON:0001045;2.73e-29;1!UBERON:0006242;2.73e-29;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.33e-15;2 | |ontology_enrichment_disease_v019=DOID:3493;1.33e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.33e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.57e-15!115;UBERON:0001154!1.32e-09!1;UBERON:0001153!1.32e-09!1;UBERON:0000029!1.84e-09!1;UBERON:0006834!2.55e-09!1;UBERON:0002581!5.28e-09!1;UBERON:0001043!5.30e-09!4;UBERON:0009143!5.30e-09!4;UBERON:0001882!5.72e-09!1;UBERON:0005403!5.72e-09!1;UBERON:0001155!8.37e-09!9;UBERON:0000059!2.77e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!8.57e-15!115;UBERON:0001154!1.32e-09!1;UBERON:0001153!1.32e-09!1;UBERON:0000029!1.84e-09!1;UBERON:0006834!2.55e-09!1;UBERON:0002581!5.28e-09!1;UBERON:0001043!5.30e-09!4;UBERON:0009143!5.30e-09!4;UBERON:0001882!5.72e-09!1;UBERON:0005403!5.72e-09!1;UBERON:0001155!8.37e-09!9;UBERON:0000059!2.77e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.73e-29;1!UBERON:0001153;2.73e-29;1!UBERON:0009854;2.73e-29;1!UBERON:0001155;1.69e-13;9!UBERON:0000059;3.13e-11;11!UBERON:0002110;1.04e-10;3!UBERON:0009856;2.35e-08;4!UBERON:0000160;3.14e-07;17!UBERON:0004907;6.21e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001154;2.73e-29;1!UBERON:0001153;2.73e-29;1!UBERON:0009854;2.73e-29;1!UBERON:0001155;1.69e-13;9!UBERON:0000059;3.13e-11;11!UBERON:0002110;1.04e-10;3!UBERON:0009856;2.35e-08;4!UBERON:0000160;3.14e-07;17!UBERON:0004907;6.21e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.20e-29,1;UBERON:0001153,4.20e-29,1;UBERON:0001045,4.20e-29,1;UBERON:0001155,1.69e-13,9;UBERON:0000059,3.14e-11,11;UBERON:0002110,9.90e-11,3;UBERON:0006242,9.90e-11,3;UBERON:0000160,3.14e-07,17;UBERON:0004907,6.77e-07,5 | |||
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|short_description=p5@EFHC2 | |short_description=p5@EFHC2 | ||
}} | }} |
Latest revision as of 03:09, 25 September 2015
Short description: | p5@EFHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EFHC2_5end |
Coexpression cluster: | C347_carcinoid_retinoblastoma_neuroblastoma_Mast_Smooth_parietal_Fibroblast |
Association with transcript: | -36bp_to_ENST00000343571_5end |
EntrezGene: | EFHC2 |
HGNC: | 26233 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.37e-15 | 2 |
keratinocyte | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.20e-29 | 1 |
caecum | 4.20e-29 | 1 |
midgut | 4.20e-29 | 1 |
colon | 1.69e-13 | 9 |
large intestine | 3.14e-11 | 11 |
gallbladder | 9.90e-11 | 3 |
gall bladder primordium | 9.90e-11 | 3 |
intestine | 3.14e-07 | 17 |
lower digestive tract | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.33e-15 | 2 |